Stephan Steigele

Comparative Analysis of Structured RNAs in S. cerevisiae Indicates a Multitude of Different Functions (2008)

Stephan Steigele, Wolfgang Huber, Claudia Fried, Peter F. Stadler, Kay Nieselt

Background: Non-coding RNAs (ncRNAs) are in emerging focus for both computational analysis and experimental research resulting in a growing number of novel, non-protein coding transcripts with often...

Comparative analysis of structured RNAs in S. cerevisiaeindicates a multitude of different functions (2007)

Steigele, Stephan, Huber, Wolfgang, Stocsits, Claudia, Stadler, Peter F, Nieselt, Kay

Abstract Background Non-coding RNAs (ncRNAs) are an emerging focus for both computational analysis and experimental research, resulting in a growing number of novel, non-protein coding transcripts...

On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences (2006)

Lehmann, Katharina A, Kaufmann, Michael, Steigele, Stephan, Nieselt, Kay

Abstract Given a set S of n locally aligned sequences, it is a needed prerequisite to partition it into groups of very similar sequences to facilitate subsequent computations, such as the generation...

Open reading frames provide a rich pool of potential natural antisense transcripts in fungal genomes (2005)

Steigele, Stephan, Nieselt, Kay

Natural antisense transcripts are reported from all kingdoms of life and several recent reports of genomewide screens indicate that they are widely distributed. These transcripts seem to be involved...

Regional patterns of gene expression in human and chimpanzee brains. (2004)

Khaitovich, Philipp, Muetzel, Bjoern, She, Xinwei, Lachmann, Michael, Hellmann, Ines, Dietzsch, Janko, ...

We have analyzed gene expression in various brain regions of humans and chimpanzees. Within both human and chimpanzee individuals, the transcriptomes of the cerebral cortex are very similar to each...

Regional Patterns of Gene Expression in Human and Chimpanzee Brains (2004)

Khaitovich, Philipp, Muetzel, Bjoern, She, Xinwei, Lachmann, Michael, Hellmann, Ines, Dietzsch, Janko, ...

We have analyzed gene expression in various brain regions of humans and chimpanzees. Within both human and chimpanzee individuals, the transcriptomes of the cerebral cortex are very similar to each...

Regional Patterns of Gene Expression in Human and Chimpanzee Brains

Khaitovich, Philipp, Muetzel, Bjoern, She, Xinwei, Lachmann, Michael, Hellmann, Ines, Dietzsch, Janko, ...

We have analyzed gene expression in various brain regions of humans and chimpanzees. Within both human and chimpanzee individuals, the transcriptomes of the cerebral cortex are very similar to each...

Open reading frames provide a rich pool of potential natural antisense transcripts in fungal genomes

Steigele, Stephan, Nieselt, Kay

Natural antisense transcripts are reported from all kingdoms of life and several recent reports of genomewide screens indicate that they are widely distributed. These transcripts seem to be involved...

On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences

Lehmann, Katharina A, Kaufmann, Michael, Steigele, Stephan, Nieselt, Kay

Given a set S of n locally aligned sequences, it is a needed prerequisite to partition it into groups of very similar sequences to facilitate subsequent computations, such as the generation of a...

Regional Patterns of Gene Expression in Human and Chimpanzee Brains

Khaitovich, Philipp, Muetzel, Bjoern, She, Xinwei, Lachmann, Michael, Hellmann, Ines, Dietzsch, Janko, ...

We have analyzed gene expression in various brain regions of humans and chimpanzees. Within both human and chimpanzee individuals, the transcriptomes of the cerebral cortex are very similar to each...

Open reading frames provide a rich pool of potential natural antisense transcripts in fungal genomes

Steigele, Stephan, Nieselt, Kay

Natural antisense transcripts are reported from all kingdoms of life and several recent reports of genomewide screens indicate that they are widely distributed. These transcripts seem to be involved...

On the maximal cliques in c-max-tolerance graphs and their application in clustering molecular sequences

Lehmann, Katharina A, Kaufmann, Michael, Steigele, Stephan, Nieselt, Kay

Given a set S of n locally aligned sequences, it is a needed prerequisite to partition it into groups of very similar sequences to facilitate subsequent computations, such as the generation of a...