Leaf litter decomposition -- Estimates of global variability based on Yasso07 model (2009)
Tuomi, M., Thum, T., Järvinen, H., Fronzek, S., Berg, B., Harmon, M., ...
Litter decomposition is an important process in the global carbon cycle. It accounts for most of the heterotrophic soil respiration and results in formation of more stable soil organic carbon (SOC)...
Xenobiotic induced liver injury is a leading cause for drug withdrawal and toxicogenomics may help to identify molecular causes. Here we report studies with cultures of human hepatocytes to detect...
Activation of the lectin-like oxLDL receptor (LOX-1) promotes atherosclerosis. Oxidized LDL (OxLDL) increases production of reactive oxygen species (ROS) and leads to the development of endothelial...
Beineke, A, Markus, S., Borlak, J., Thum, T., Baumgärtner, W.
Canine distemper virus (CDV) infection of the central nervous system results in lesions of the gray and white matter. While a biphasic disease process has been discussed for leukoencephalitis with a...
T. Thum, T. Aalto, T. Laurila, M. Aurela, A. Lindroth, T. Vesala
The seasonality of the NEE of the northern boreal coniferous forests was investigated by means of inversion modelling using eddy covariance data. Eddy covariance data was used to optimize the...
T. Thum, T. Aalto, T. Laurila, M. Aurela, A. Lindroth, T. Vesala
The biochemical seasonality of the northern boreal coniferous forests was investigated by means of inversion modelling using eddy covariance data. Eddy covariance data was used to optimize the...
T. Thum, T. Aalto, T. Laurila, M. Aurela, A. Lindroth, T. Vesala
The biochemical seasonality of the northern boreal coniferous forests was investigated by means of inversion modelling using eddy covariance data. Eddy covariance data was used to optimize the...
Thum, T., Hoeber, S., Froese, S., Klink, I., Stichtenoth, D.O., Galuppo, P., ...
Aging is associated with an increased risk for atherosclerosis. A possible cause is low numbers and dysfunction of endothelial progenitor cells (EPC) which insufficiently repair damaged vascular...
MicroRNAs in the human heart: A clue to fetal gene reprogramming in heart failure (2007)
Thum, T., Galuppo, P., Wolf, C., Fiedler, J., Kneitz, S., Laake, L.W. Van, ...
Background - Chronic heart failure is characterized by left ventricular remodeling and reactivation of a fetal gene program; the underlying mechanisms are only partly understood. Here we provide...
T. Aalto, J. Hatakka, U. Karstens, M. Aurela, T. Thum, A. Lohila
CO2 fluxes and concentrations were simulated in the planetary boundary layer above subarctic hilly terrain using a three dimensional model. The model solves the transport equations in the local scale...
Thum, T., Erpenbeck, V.J., Moeller, J., Hohlfeld, J.M., Krug, N., Borlak, J.
Background. Cytochrome P450 monooxygenases (CYP) play an important role in the defense against inhaled toxicants and expression of CYP enzymes may differ amongst various lung cells and tissue...
Acetylsalicylic acid (aspirin) reduces endothelial cell senescence (2006)
Scalera, F., Borlak, J., Schubert, B., Martens-Lobenhoffer, J., Thum, T., Frolich, J.C., ...
Statins delay endothelial cell senescence (2006)
Scalera, F., Borlak, J., Schubert, B., Martens-Lobenhoffer, J., Thum, T., Frölich, J.C., ...
Aalto, T., Hatakka, J., Karstens, U., Aurela, M., Thum, T., Lohila, A.
CO2 fluxes and concentrations were simulated in the planetary boundary layer above subarctic hilly terrain using a three dimensional model. The model solves the transport equations in the local scale...
Aalto, T., Hatakka, J., Karstens, U., Aurela, M., Thum, T., Lohila, A.
CO2 fluxes and concentrations were simulated in the planetary boundary layer above subarctic hilly terrain using a three dimensional model. The model solves the transport equations in the local scale...
Gerhard, R., Tatge, H., Genth, H., Thum, T., Borlak, J., Fritz, G., ...
Clostridium difficile toxin A mono-glucosylates the Rho family GTPases Rho, Rac, and Cdc42. Glucosylation leads to functional inactivation of Rho GTPases and causes disruption of the actin...
PCR-Reaktionsgemisch fuer Fluoreszenz-basierende Genexpressions- und Genmutationsanalysen (2005)
WO 200222865 A UPAB: 20020618 NOVELTY - Polymerase chain reaction (PCR) mixture (A) for fluorescent-based gene expression and gene mutation analysis comprising: a Taq polymerase (I); bovine serum...
Toxicogenomics applied to cardiovascular toxicity (2005)
Toxicogenomics is an emerging discipline that uses genomics tools, including gene expression profiling technologies, to address problems of toxicological significance. Initial results are now...
Aalto, T., Hatakka, J., Karstens, U., Aurela, M., Thum, T., Lohila, A.
CO2 fluxes and concentrations were simulated in the planetary boundary layer above subarctic hilly terrain using a three dimensional model. The model solves the transport equations in the local scale...
Aalto, T., Hatakka, J., Karstens, U., Aurela, M., Thum, T., Lohila, A.
CO2 fluxes and concentrations were simulated in the planetary boundary layer above subarctic hilly terrain using a three dimensional model. The model solves the transport equations in the local scale...
H. Vehkamäki, M. Dal Maso, T. Hussein, R. Flanagan, A. Hyvärinen, J. Lauros, ...
During the calendar years 1998-2002, 147 clear 8nm diameter particle formation events have been identified at the SMEAR I station in Värriö, northern Finland. The events have been...
Oxidized low-density lipoprotein (oxLDL) is an important risk factor for vascular injury. Its role on coronary vasoconstriction remains speculative. Endothelial monooxygenases (cytochrome P450s...
Scalera, F., Borlak, J., Beckmann, B., Martens-Lobenhoffer, J., Thum, T., Tager, M., ...
OBJECTIVE: Asymmetrical dimethylarginine (ADMA) is an endogenous inhibitor of nitric oxide synthase (NOS), and its accumulation has been associated with cardiovascular disease. We aimed to...
Androgen metabolism in thymus of fetal and adult rats (2004)
Borlak, J., Schulte, I., Thum, T.
Cytochrome P450 (P450) monooxygenases play a role in target tissue metabolic activation of xenobiotics and/or endogenous compounds, such as vasoactive molecules or hormones. Indeed, tissue-specific...
Vehkamäki, H., Dal Maso, M., Hussein, T., Flanagan, R., Hyvärinen, A., Lauros, J., ...
We have identified 147 clear 8 nm diameter particle formation events at the SMEAR I station in Värriö, northern Finland during calendar years 1998?2002. The events have been classified in detail...
Vehkamäki, H., Dal Maso, M., Hussein, T., Flanagan, R., Hyvärinen, A., Lauros, J., ...
During the calendar years 1998-2002, 147 clear 8nm diameter particle formation events have been identified at the SMEAR I station in Värriö, northern Finland. The events have been classified in...
Vehkamäki, H., Dal Maso, M., Hussein, T., Flanagan, R., Hyvärinen, A., Lauros, J., ...
We have identified 147 clear 8 nm diameter particle formation events at the SMEAR I station in Värriö, northern Finland during calendar years 1998?2002. The events have been classified in detail...
Vehkamäki, H., Dal Maso, M., Hussein, T., Flanagan, R., Hyvärinen, A., Lauros, J., ...
During the calendar years 1998-2002, 147 clear 8nm diameter particle formation events have been identified at the SMEAR I station in Värriö, northern Finland. The events have been classified in...
H. Vehkamäki, M. Dal Maso, T. Hussein, R. Flanagan, A. Hyvärinen, J. Lauros, ...
We have identified 147 clear 8 nm diameter particle formation events at the SMEAR I station in Värriö, northern Finland during calendar years 1998–2002. The events have been...
Verapamil: Metabolism in cultures of primary human coronary arterial endothelial cells (2003)
Borlak, J., Walles, M., Levsen, K., Thum, T.
Endothelium is a metabolically active secretory tissue and an important barrier for metabolic products. Little is known about its contribution to drug oxidation. We investigated the gene and protein...
Hallmarks of ion channel gene expression in end-stage heart failure (2003)
Electrical conductance is greatly altered in end-stage heart failure, but little is known about the underlying events. We therefore investigated the expression of genes coding for major inward and...
Gene expression profiles in the closing ductus and the great vessels (2003)
Bökenkamp, R., Thum, T., Borlak, J.
The pharmacological approach to ductal patency is currently focused on prostaglandin metabolism. The role of other vascular factors for ductal remodelling is under discussion. Aim of the present...
Borlak, J., Walles, M., Elend, M., Thum, T., Preiss, A., Levsen, K.
1. Verapamil is a well-known and world-wide prescribed calcium antagonist, but it suffers from extensive first-pass metabolism. Although it has been marketed for many years, a complete understanding...
Thum, T., Tsikas, D., Frölich, J.F., Borlak, J.
Growth hormone deficiency is linked to cardiovascular disease and particularly increased peripheral vascular resistance. Surprisingly, its role in endothelial nitric oxide (NO) synthetase (eNOS)...
A rapid and simple CYP2D6 genotyping assay - Case study with the analgetic tramadol (2003)
Borlak, J., Hermann, R., Erb, K., Thum, T.
There is substantial evidence for a causal relationship between genetic variability of the CYP2D6 gene and changes in the pharmacokinetics of drugs. Therefore, knowledge of single-nucleotide...
Walles, M., Thum, T., Levsen, K., Borlak, J.
Verapamil is a widely prescribed calcium antagonist, but suffers from extensive first pass metabolism. Despite its frequent use in drug metabolism a complete understanding of its metabolic pathway is...
Aspirin reduces endothelial-cell senescence: Meeting Abstract (2003)
Scalera, F., Thum, T., Borlak, J., Schubert, B., Frolich, J.C., Bode-Boger, S.M.
Borlak, J., Dangers, M., Thum, T.
Human exposure to polychlorinated biphenyls (PCBs) may lead to increased albumin serum levels, but little is known about the underlying events. Certain PCBs are also ligands for the aryl hydrocarbon...
1. Polychlorinated biphenyls (PCBs) are well-known environmental pollutants that bioaccumulate mainly in the fatty tissue of animals and humans. Although contamination occurs primarily via the food...
Testosterone, cytochrome P450, and cardiac hypertrophy (2002)
Cytochrome P450 mono-oxygenases (CYP) play an essential role in steroid metabolism, and there is speculation that sex hormones might influence cardiac mass and physiology. As CYP mono-oxygenases...
Verapamil. New insight into the molecular mechanism of drug oxidation in the human heart (2002)
Walles, M., Thum, T., Levsen, K., Borlak, J.
Verapamil is a commonly prescribed cardiovascular drug, but surprisingly its metabolism in the target tissue of pharmacotherapy is basically unknown. We therefore investigated its biotransformation...
Various protocols for the isolation and cultivation of adult rat cardiomyocytes were compared, and the cytoprotective potential of the reversible myosin ATPase inhibitor butanedione monoxime (BDM)...
BACKGROUND: Butanedione monoxime (BDM) is a reversible myosin ATPase inhibitor. Its use in transplantation medicine may be of benefit in the preservation of hearts. As little is known about its...
Walles, M., Thum, T., Levsen, K., Borlak, J.
A substantial number of drugs act either directly or indirectly on the heart, but surprisingly, little is known about drug oxidation in the heart. We therefore investigated the metabolism of the...
Aroclor 1254 is a complex mixture of polychlorinated biphenyls and is well known for its potency to induce drug-metabolising enzymes, but little is known about its ability to modulate gene expression...
1. Primary cultures of cardiomyocytes provide a valuable tool for the study of the pharmacological and toxicological properties of drugs and chemicals, but for several technical reasons...
There are a substantial number of drugs acting either directly or indirectly on the heart, but surprisingly, little is known about the metabolic capacity of heart muscle cells. We therefore...
Thum, T., Haverich, A., Borlak, J.
We investigated the gene expression of the nuclear transcription factors c/EBPalpha, GATA-2, and the silencer Oct-1 in conjunction with the gene expression of all major cytochrome P450 genes and of...
Borlak, J., Thum, T., Landt, O., Erb, K., Hermann, R.
Recent research has shown that congenital nonhemolytic low grade hyperbilirubinemias in patients with Gilbert's syndrome (GS) are linked to mutations in the TATA box upstream of the uridine...
Böger, R.H., Sydow, K., Borlak, J., Thum, T., Lenzen, H., Schubert, B., ...
Asymmetrical dimethylarginine (ADMA) is an endogenous nitric oxide synthase inhibitor. It is formed by protein arginine N-methyltransferases (PRMTs), which utilize S-adenosylmethionine as methyl...
Gene expression in distinct regions of the heart (2000)
BACKGROUND: Cytochrome P450 mono-oxygenases bring about metabolism of many drugs, including verapamil, but no information is available on the metabolism of such drugs in the human heart. METHODS: We...