Tomohiko Mizutani

Mathematical and Computing Sciences (2008)

Tomohiko Mizutani, Akiko Takeda, Tomohiko Mizutani, Akiko Takeda

DEMiCs: A software package for computing the mixed volume via dynamic enumeration of all mixed cells

On the Face Lattice of the Metric Polytope (2007)

Antoine Deza Komei, Antoine Deza, Komei Fukuda, Tomohiko Mizutani, Cong Vo

In this paper we study enumeration problems for polytopes arising from combinatorial optimization problems. While these polytopes turn out to be quickly intractable for enumeration algorithms...

Alterations of cellular physiology in Escherichia coli in response to oxidative phosphorylation impaired by defective F1-ATPase (2006)

Noda, Sakiko, Takezawa, Yuji, Mizutani, Tomohiko, Asakura, Tomoaki, Nishiumi, Eiichiro, Onoe, Kazunori, ...

The physiological changes in an F1-ATPase-defective mutant of Escherichia coli W1485 growing in a glucose-limited chemostat included a decreased growth yield (60%) and increased specific rates of...

Alterations of cellular physiology in Escherichia coli in response to oxidative phosphorylation impaired by defective F1-ATPase. (2006)

Noda, Sakiko, Takezawa, Yuji, Mizutani, Tomohiko, Asakura, Tomoaki, Nishiumi, Eiichiro, Onoe, Kazunori, ...

The physiological changes in an F1-ATPase-defective mutant of Escherichia coli W1485 growing in a glucose-limited chemostat included a decreased growth yield (60%) and increased specific rates of...

Alterations of cellular physiology in Escherichia coli in response to oxidative phosphorylation impaired by defective F1-ATPase. (2006)

Noda, Sakiko, Takezawa, Yuji, Mizutani, Tomohiko, Asakura, Tomoaki, Nishiumi, Eiichiro, Onoe, Kazunori, ...

The physiological changes in an F1-ATPase-defective mutant of Escherichia coli W1485 growing in a glucose-limited chemostat included a decreased growth yield (60%) and increased specific rates of...

Dynamic Enumeration of All Mixed Cells (2006)

Tomohiko Mizutani, Akiko Takeda, Masakazu Kojima

Abstract. The polyhedral homotopy method, which has been known as a powerful numerical method for computing all isolated zeros of a polynomial system, requires all mixed cells of the support of the...

SERIES B: Operations Research B-422 Dynamic Enumeration of All Mixed Cells (2006)

Tomohiko Mizutani, Akiko Takeda, Masakazu Kojima, Tomohiko Mizutani, Akiko Takeda, Masakazu Kojima

Abstract. The polyhedral homotopy method, which has been known as a powerful numerical method for computing all isolated zeros of a polynomial system, requires all mixed cells of the support of the...

PHoM – a polyhedral homotopy continuation method for polynomial systems (2004)

Takayuki Gunji, Sunyoung Kim, Masakazu Kojima, Akiko Takeda, Katsuki Fujisawa, Tomohiko Mizutani

PHoM is a software package in C++ for finding all isolated solutions of polynomial systems using a polyhedral homotopy continuation method. Among three modules constituting the package, the first...

Conservation of the biochemical mechanisms of signal transduction among mammalian Notch family members

Mizutani, Tomohiko, Taniguchi, Yoshihito, Aoki, Tomokazu, Hashimoto, Nobuo, Honjo, Tasuku

Mouse Notch1, which plays an important role in cell fate determination in development, is proteolytically processed within its transmembrane domain by unidentified γ-secretase-like activity that...

Notch receptor cleavage depends on but is not directly executed by presenilins

Taniguchi, Yoshihito, Karlström, Helena, Lundkvist, Johan, Mizutani, Tomohiko, Otaka, Akira, Vestling, Monica, ...

Notch receptors undergo three distinct proteolytic cleavages during maturation and activation. The third cleavage occurs within the plasma membrane and results in the release and translocation of the...

Conservation of the biochemical mechanisms of signal transduction among mammalian Notch family members

Mizutani, Tomohiko, Taniguchi, Yoshihito, Aoki, Tomokazu, Hashimoto, Nobuo, Honjo, Tasuku

Mouse Notch1, which plays an important role in cell fate determination in development, is proteolytically processed within its transmembrane domain by unidentified γ-secretase-like activity that...

Notch receptor cleavage depends on but is not directly executed by presenilins

Taniguchi, Yoshihito, Karlström, Helena, Lundkvist, Johan, Mizutani, Tomohiko, Otaka, Akira, Vestling, Monica, ...

Notch receptors undergo three distinct proteolytic cleavages during maturation and activation. The third cleavage occurs within the plasma membrane and results in the release and translocation of the...

Alterations of Cellular Physiology in Escherichia coli in Response to Oxidative Phosphorylation Impaired by Defective F1-ATPase

Noda, Sakiko, Takezawa, Yuji, Mizutani, Tomohiko, Asakura, Tomoaki, Nishiumi, Eiichiro, Onoe, Kazunori, ...

The physiological changes in an F1-ATPase-defective mutant of Escherichia coli W1485 growing in a glucose-limited chemostat included a decreased growth yield (60%) and increased specific rates of...