V. Matys

Publication List Details

Period

1992 - 2008

Number

17

Co-Authors

Genome wide prediction of HNF4 alpha functional binding sites by the use of local and global sequence context (2008)

Kel, A.E., Niehof, M., Matys, V., Zemlin, R., Borlak, J.

We report an application of machine learning algorithms that enables prediction of the functional context of transcription factor binding sites in the human genome. We demonstrate that our method...

Genome wide prediction of HNF4 alpha functional binding sites by the use of local and global sequence context (2008)

Kel, A.E., Niehof, M., Matys, V., Zemlin, R., Borlak, J.

We report an application of machine learning algorithms that enables prediction of the functional context of transcription factor binding sites in the human genome. We demonstrate that our method...

TRANSFAC(R) and its module TRANSCompel(R): transcriptional gene regulation in eukaryotes (2006)

Matys, V., Kel-Margoulis, O. V., Fricke, E., Liebich, I., Land, S., Barre-Dirrie, A., ...

The TRANSFAC® database on transcription factors, their binding sites, nucleotide distribution matrices and regulated genes as well as the complementing database TRANSCompel® on composite elements...

A novel computational approach for the prediction of networked transcription factors of aryl hydrocarbon-receptor-regulated genes (2004)

Kel, A., Reymann, S., Matys, V., Nettesheim, P., Wingender, E., Borlak, J.

A novel computational method based on a genetic algorithm was developed to study composite structure of promoters of coexpressed genes. Our method enabled an identification of combinations of...

TRANSFAC(R): transcriptional regulation, from patterns to profiles (2003)

Matys, V., Fricke, E., Geffers, R., Gößling, E., Haubrock, M., Hehl, R., ...

The TRANSFAC® database on eukaryotic transcriptional regulation, comprising data on transcription factors, their target genes and regulatory binding sites, has been extended and further developed,...

The TRANSFAC system on gene expression regulation (2001)

Wingender, E., Chen, X., Fricke, E., Geffers, R., Hehl, R., Liebich, I., ...

The TRANSFAC database on transcription factors and their DNA-binding sites and profiles (http://www.gene-regulation.de/) has been quantitatively extended and supplemented by a number of...

TRANSFAC: an integrated system for gene expression regulation (2000)

Wingender, E., Chen, X., Hehl, R., Karas, H., Liebich, I., Matys, V., ...

TRANSFAC is a database on transcription factors, their genomic binding sites and DNA-binding profiles (http://transfac.gbf.de/TRANSFAC/ ). Its content has been enhanced, in particular...

Organization as author and publisher Institute of Medicine (US). Looking at the future of the Medicaid program (1992)

V. Matys, E. Fricke, R. Geffers, E. Gößling, M. Haubrock, R. Hehl, ...

The TRANSFAC 1 database on eukaryotic transcriptional regulation, comprising data on transcription factors, their target genes and regulatory binding sites, has been extended and further developed,...

The TRANSFAC system on gene expression regulation

Wingender, E., Chen, X., Fricke, E., Geffers, R., Hehl, R., Liebich, I., ...

The TRANSFAC database on transcription factors and their DNA-binding sites and profiles (http://www.gene-regulation.de/) has been quantitatively extended and supplemented by a number of modules....

TRANSFAC: an integrated system for gene expression regulation

Wingender, E., Chen, X., Hehl, R., Karas, H., Liebich, I., Matys, V., ...

TRANSFAC is a database on transcription factors, their genomic binding sites and DNA-binding profiles (http://transfac.gbf.de/TRANSFAC/ ). Its content has been enhanced, in particular by information...

TRANSFAC®: transcriptional regulation, from patterns to profiles

Matys, V., Fricke, E., Geffers, R., Gößling, E., Haubrock, M., Hehl, R., ...

The TRANSFAC® database on eukaryotic transcriptional regulation, comprising data on transcription factors, their target genes and regulatory binding sites, has been extended and further developed,...

TRANSFAC® and its module TRANSCompel®: transcriptional gene regulation in eukaryotes

Matys, V., Kel-Margoulis, O. V., Fricke, E., Liebich, I., Land, S., Barre-Dirrie, A., ...

The TRANSFAC® database on transcription factors, their binding sites, nucleotide distribution matrices and regulated genes as well as the complementing database TRANSCompel® on composite elements...

The TRANSFAC system on gene expression regulation

Wingender, E., Chen, X., Fricke, E., Geffers, R., Hehl, R., Liebich, I., ...

The TRANSFAC database on transcription factors and their DNA-binding sites and profiles (http://www.gene-regulation.de/) has been quantitatively extended and supplemented by a number of modules....

TRANSFAC: an integrated system for gene expression regulation

Wingender, E., Chen, X., Hehl, R., Karas, H., Liebich, I., Matys, V., ...

TRANSFAC is a database on transcription factors, their genomic binding sites and DNA-binding profiles (http://transfac.gbf.de/TRANSFAC/ ). Its content has been enhanced, in particular by information...

TRANSFAC®: transcriptional regulation, from patterns to profiles

Matys, V., Fricke, E., Geffers, R., Gößling, E., Haubrock, M., Hehl, R., ...

The TRANSFAC® database on eukaryotic transcriptional regulation, comprising data on transcription factors, their target genes and regulatory binding sites, has been extended and further developed,...

TRANSFAC® and its module TRANSCompel®: transcriptional gene regulation in eukaryotes

Matys, V., Kel-Margoulis, O. V., Fricke, E., Liebich, I., Land, S., Barre-Dirrie, A., ...

The TRANSFAC® database on transcription factors, their binding sites, nucleotide distribution matrices and regulated genes as well as the complementing database TRANSCompel® on composite elements...