Valentina Moskvina

A genome-wide association study for late-onset Alzheimer's disease using DNA pooling (2008)

Abraham, Richard, Moskvina, Valentina, Sims, Rebecca, Hollingworth, Paul, Morgan, Angharad, Georgieva, Lyudmila, ...

Abstract Background Late-onset Alzheimer's disease (LOAD) is an age related neurodegenerative disease with a high prevalence that places major demands on healthcare resources in societies with...

Molecular dissection of NRG1-ERBB4 signaling implicates PTPRZ1 as a potential schizophrenia susceptibility gene (2008)

Buxbaum, J. D., Georgieva, Lyudmila, Young, J. J., Plescia, C., Kajiwara, Y., Jiang, Y., ...

Neuregulin and the neuregulin receptor ERBB4 have been genetically and functionally implicated in schizophrenia. In this study, we used the yeast two-hybrid system to identify proteins that interact...

Molecular dissection of NRG1-ERBB4 signaling implicates PTPRZ1 as a potential schizophrenia susceptibility gene (2008)

Buxbaum, J. D., Georgieva, Lyudmila, Young, J. J., Plescia, C., Kajiwara, Y., Jiang, Y., ...

Neuregulin and the neuregulin receptor ERBB4 have been genetically and functionally implicated in schizophrenia. In this study, we used the yeast two-hybrid system to identify proteins that interact...

Identification of loci associated with schizophrenia by genome-wide association and follow-up (2008)

Donovan, Michael C., Craddock, Nicholas, Norton, Nadine, Williams, Hywel, Peirce, Timothy, Moskvina, Valentina, ...

We carried out a genome-wide association study of schizophrenia (479 cases, 2,937 controls) and tested loci with P < 10-5 in up to 16,726 additional subjects. Of 12 loci followed up, 3 had strong...

Analyses of single marker and pairwise effects of candidate loci for rheumatoid arthritis using logistic regression and random forests (2007)

Glaser, Beate, Nikolov, Ivan, Chubb, Daniel, Hamshere, Marian L, Segurado, Ricardo, Moskvina, Valentina, ...

Abstract Using parametric and nonparametric techniques, our study investigated the presence of single locus and pairwise effects between 20 markers of the Genetic Analysis Workshop 15 (GAW15) North...

Combining linkage data sets for meta-analysis and mega-analysis: the GAW15 rheumatoid arthritis data set (2007)

Segurado, Ricardo, Hamshere, Marian L, Glaser, Beate, Nikolov, Ivan, Moskvina, Valentina, Holmans, Peter A

Abstract We have used the genome-wide marker genotypes from Genetic Analysis Workshop 15 Problem 2 to explore joint evidence for genetic linkage to rheumatoid arthritis across several samples. The...

Large-scale linkage analysis of 1302 affected relative pairs with rheumatoid arthritis (2007)

Hamshere, Marian L, Segurado, Ricardo, Moskvina, Valentina, Nikolov, Ivan, Glaser, Beate, Holmans, Peter A

Abstract Rheumatoid arthritis is the most common systematic autoimmune disease and its etiology is believed to have both strong genetic and environmental components. We demonstrate the utility of...

Strong evidence that GNB1L is associated with schizophrenia (2007)

Williams, Nigel Melville, Glaser, Beate, Norton, Nadine, Williams, Hywel John, Pierce, Timothy, Moskvina, Valentina, ...

Evidence that a gene or genes on chromosome 22 is involved in susceptibility to schizophrenia comes from two sources: the increased incidence of schizophrenia in individuals with 22q11 deletion...

Genome-wide association study of 14,000 cases of seven common diseases and 3,000 shared controls (2007)

Cardon, Lon R, Craddock, Nick, Deloukas, Panos, Duncanson, Audrey, Kwiatkowski, Dominic P, ...

There is increasing evidence that genome-wide association ( GWA) studies represent a powerful approach to the identification of genes involved in common human diseases. We describe a joint GWA study...

Detailed analysis of the relative power of direct and indirect association studies and the implications for their interpretation (2007)

Moskvina, Valentina, O'Donovan, Michael Conlon

OBJECTIVES: Genetic association studies are usually based upon restricted sets of 'tag' markers selected to represent the total sequence variation. Tag selection is often determined by some threshold...

Convergent evidence that oligodendrocyte lineage transcription factor 2 (OLIG2) and interacting genes influence susceptibility to schizophrenia (2006)

Georgieva, Lyudmila, Moskvina, Valentina, Peirce, Timothy Rowan, Norton, Nadine, Bray, Nicholas John, Jones, Lesley, ...

Abnormal oligodendrocyte function has been postulated as a primary etiological event in schizophrenia. Oligodendrocyte lineage transcription factor 2 (OLIG2) encodes a transcription factor central to...

Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data (2006)

Jones, Lesley, Goldstein, Darlene R, Hughes, Gareth, Strand, Andrew D, Collin, Francois, Dunnett, Stephen B, ...

Abstract Background Gene expression microarray experiments are expensive to conduct and guidelines for acceptable quality control at intermediate steps before and after the samples are hybridised to...

Effects of differential genotyping error rate on the Type 1 error probability of case-control studies (2006)

Moskvina, Valentina, Craddock, Nicholas John, Holmans, Peter Alan, Owen, Michael John, O'Donovan, Michael Conlon

Objectives: It is well known that genotyping error adversely affects the power of genetic case-control association studies but there is little research on its effects on type I error, and none that...

Effects of differential genotyping error rate on the Type 1 error probability of case-control studies (2006)

Moskvina, Valentina, Craddock, Nicholas John, Holmans, Peter Alan, Owen, Michael John, O'Donovan, Michael Conlon

Objectives: It is well known that genotyping error adversely affects the power of genetic case-control association studies but there is little research on its effects on type I error, and none that...

Pooled DNA genotyping on Affymetrix SNP genotyping arrays (2006)

Kirov, George, Nikolov, Ivan, Georgieva, Lyudmila, Moskvina, Valentina, Owen, Michael J, O'Donovan, Michael C

Abstract Background Genotyping technology has advanced such that genome-wide association studies of complex diseases based upon dense marker maps are now technically feasible. However, the cost of...

Pooled DNA genotyping on Affymetrix SNP genotyping arrays (2006)

Kirov, George, Nikolov, Ivan, Georgieva, Lyudmila, Moskvina, Valentina, Owen, Michael John, O'Donovan, Michael Conlon

BACKGROUND: Genotyping technology has advanced such that genome-wide association studies of complex diseases based upon dense marker maps are now technically feasible. However, the cost of such...

Convergent evidence for 2',3'-cyclic nucleotide 3'-phosphodiesterase as a possible susceptibility gene for schizophrenia (2006)

Peirce, Timothy Rowan, Bray, Nicholas John, Williams, Nigel Melville, Norton, Nadine, Moskvina, Valentina, Preece, Anna Charlotte, ...

Context Convergent data make 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP) a candidate gene for schizophrenia. Reduced expression has been reported in the schizophrenic brain. The CNP gene maps...

Convergent evidence for 2',3'-cyclic nucleotide 3'-phosphodiesterase as a possible susceptibility gene for schizophrenia (2006)

Peirce, Timothy Rowan, Bray, Nicholas John, Williams, Nigel Melville, Norton, Nadine, Moskvina, Valentina, Preece, Anna Charlotte, ...

Context Convergent data make 2',3'-cyclic nucleotide 3'-phosphodiesterase (CNP) a candidate gene for schizophrenia. Reduced expression has been reported in the schizophrenic brain. The CNP gene maps...

Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data (2006)

Jones, Lesley, Goldstein, Darlene, Hughes, Gareth, Strand, Andrew, Collin, Francois, Dunnett, Stephen, ...

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Covariate linkage analysis of GAW14 simulated data incorporating subclinical phenotype, sex, population, parent-of-origin, and interaction (2005)

Hamshere, Marian L, MacGregor, Stuart, Moskvina, Valentina, Nikolov, Ivan N, Holmans, Peter A

Abstract Background We evaluate a method for the incorporation of covariates into linkage analysis using the Genetic Analysis Workshop 14 simulated data. Focusing on a randomly chosen replicate (42)...

Haplotypes at the dystrobrevin binding protein 1 (DTNBP1) gene locus mediate risk for schizophrenia through reduced DTNBP1 expression (2005)

Bray, Nicholas John, Preece, Anna Charlotte, Williams, Nigel Melville, Moskvina, Valentina, Buckland, Paul Robert, Owen, Michael John, ...

The DTNBP1 gene, encoding dysbindin, is now generally considered to be a susceptibility gene for schizophrenia. However, the confidence with which this hypothesis can be held has to be tempered by...

Streamlined analysis of pooled genotype data in SNP-based association studies (2005)

Moskvina, Valentina, Norton, Nadine, Williams, Nigel Melville, Holmans, Peter Alan, Owen, Michael John, O'Donovan, Michael Conlon

Several groups have developed methods for estimating allele frequencies in DNA pools as a fast and cheap way for detecting allelic association between genetic markers and disease. To obtain accurate...

Strong evidence that KIAA0319 on chromosome 6p is a susceptibility gene for developmental dyslexia (2005)

Cope, Natalie, Harold, Denise, Hill, Gary, Moskvina, Valentina, Stevenson, Jim, Holmans, Peter, ...

Linkage between developmental dyslexia (DD) and chromosome 6p has been replicated in a number of independent samples. Recent attempts to identify the gene responsible for the linkage have produced...

Haplotypes at the dystrobrevin binding protein 1 (DTNBP1) gene locus mediate risk for schizophrenia through reduced DTNBP1 expression (2005)

Bray, Nicholas J., Preece, Anna, Williams, Nigel M., Moskvina, Valentina, Buckland, Paul R., Owen, Michael J., ...

The DTNBP1 gene, encoding dysbindin, is now generally considered to be a susceptibility gene for schizophrenia. However, the confidence with which this hypothesis can be held has to be tempered by...

Haplotypes at the dystrobrevin binding protein 1 (DTNBP1) gene locus mediate risk for schizophrenia through reduced DTNBP1 expression (2005)

Bray, Nicholas J., Preece, Anna, Williams, Nigel M., Moskvina, Valentina, Buckland, Paul R., Owen, Michael J., ...

The DTNBP1 gene, encoding dysbindin, is now generally considered to be a susceptibility gene for schizophrenia. However, the confidence with which this hypothesis can be held has to be tempered by...

Identification in two independent samples of a novel schizophrenia risk haplotype of the dystobrevin binding protein gene (DTNBP1). (2004)

Williams, Nigel M., Preece, Anna Charlotte, Morris, D. W., Spurlock, Gillian, Bray, Nicholas John, Stephens, Mark Keith, ...

Context Recent research suggests that variation in the gene encoding dystrobrevin binding protein (DTNBP1) confers susceptibility to schizophrenia. Thus far, no specific risk haplotype has been...

Identification in two independent samples of a novel schizophrenia risk haplotype of the dystobrevin binding protein gene (DTNBP1). (2004)

Williams, Nigel Melville, Preece, Anna Charlotte, Morris, D. W., Spurlock, Gillian, Bray, Nicholas John, Stephens, Mark Keith, ...

Context Recent research suggests that variation in the gene encoding dystrobrevin binding protein (DTNBP1) confers susceptibility to schizophrenia. Thus far, no specific risk haplotype has been...

Allelic expression of APOE in human brain: effects of epsilon status and promoter haplotypes (2004)

Bray, Nicholas J., Jehu, Luke, Moskvina, Valentina, Buxbaum, Joseph D., Dracheva, Stella, Haroutunian, Vahram, ...

The ϵ4 haplotype of APOE is the only undisputed genetic risk factor for late onset Alzheimer's disease (LOAD). It has been proposed that at least two other polymorphisms in the promoter of the...

Allelic expression of APOE in human brain: effects of epsilon status and promoter haplotypes (2004)

Bray, Nicholas J., Jehu, Luke, Moskvina, Valentina, Buxbaum, Joseph D., Dracheva, Stella, Haroutunian, Vahram, ...

The ϵ4 haplotype of APOE is the only undisputed genetic risk factor for late-onset Alzheimer's disease (LOAD). It has been proposed that at least two other polymorphisms in the promoter of the...

Allelic expression of APOE in human brain: effects of epsilon status and promoter haplotypes (2004)

Bray, Nicholas J., Jehu, Luke, Moskvina, Valentina, Buxbaum, Joseph D., Dracheva, Stella, Haroutunian, Vahram, ...

The ϵ4 haplotype of APOE is the only undisputed genetic risk factor for late onset Alzheimer's disease (LOAD). It has been proposed that at least two other polymorphisms in the promoter of the...

Approximate projectors in singular spectrum analysis (2003)

Moskvina, Valentina, Schmidt, Karl Michael

Singular spectrum analysis (SSA) is a method of time-series analysis based on the singular value decomposition of an associated Hankel matrix. We present an approach to SSA using an effective and...

Strong Evidence That KIAA0319 on Chromosome 6p Is a Susceptibility Gene for Developmental Dyslexia

Cope, Natalie, Harold, Denise, Hill, Gary, Moskvina, Valentina, Stevenson, Jim, Holmans, Peter, ...

Linkage between developmental dyslexia (DD) and chromosome 6p has been replicated in a number of independent samples. Recent attempts to identify the gene responsible for the linkage have produced...

Convergent evidence that oligodendrocyte lineage transcription factor 2 (OLIG2) and interacting genes influence susceptibility to schizophrenia

Georgieva, Lyudmila, Moskvina, Valentina, Peirce, Tim, Norton, Nadine, Bray, Nicholas J., Jones, Lesley, ...

Abnormal oligodendrocyte function has been postulated as a primary etiological event in schizophrenia. Oligodendrocyte lineage transcription factor 2 (OLIG2) encodes a transcription factor central to...

Analyses of single marker and pairwise effects of candidate loci for rheumatoid arthritis using logistic regression and random forests

Glaser, Beate, Nikolov, Ivan, Chubb, Daniel, Hamshere, Marian L, Segurado, Ricardo, Moskvina, Valentina, ...

Using parametric and nonparametric techniques, our study investigated the presence of single locus and pairwise effects between 20 markers of the Genetic Analysis Workshop 15 (GAW15) North American...

Large-scale linkage analysis of 1302 affected relative pairs with rheumatoid arthritis

Hamshere, Marian L, Segurado, Ricardo, Moskvina, Valentina, Nikolov, Ivan, Glaser, Beate, Holmans, Peter A

Rheumatoid arthritis is the most common systematic autoimmune disease and its etiology is believed to have both strong genetic and environmental components. We demonstrate the utility of including...

Combining linkage data sets for meta-analysis and mega-analysis: the GAW15 rheumatoid arthritis data set

Segurado, Ricardo, Hamshere, Marian L, Glaser, Beate, Nikolov, Ivan, Moskvina, Valentina, Holmans, Peter A

We have used the genome-wide marker genotypes from Genetic Analysis Workshop 15 Problem 2 to explore joint evidence for genetic linkage to rheumatoid arthritis across several samples. The data...