Petteri Sevon, Hannu Toivonen, Vesa Ollikainen
Abstract—We describe TreeDT, a novel association-based gene mapping method. Given a set of disease-associated haplotypes and a set of control haplotypes, TreeDT predicts likely locations of a...
Gene Mapping by Haplotype Pattern Mining Hannu T.T. Toivonen1 (2008)
Kari Vasko, Vesa Ollikainen, Petteri Sevon, Heikki Mannila, Juha Kere
Abstract Genetic markers are being increasingly utilized in genemapping. Discovery of associations between markers and patient phenotypes-- such as a disease status-- enablesthe identification of...
PairsDB atlas of protein sequence space (2008)
Heger, Andreas, Korpelainen, Eija, Hupponen, Taavi, Mattila, Kimmo, Ollikainen, Vesa, Holm, Liisa
Sequence similarity/database searching is a cornerstone of molecular biology. PairsDB is a database intended to make exploring protein sequences and their similarity relationships quick and easy....
Rova, Meri, Haataja, Ritva, Marttila, Riitta, Ollikainen, Vesa, Tammela, Outi, Hallman, Mikko
Bronchopulmonary dysplasia (BPD), the most common chronic lung disease in infancy, is influenced by a number of antenatal and postnatal risk factors and is mostly preceded by respiratory distress...
Rova, Meri, Haataja, Ritva, Marttila, Riitta, Ollikainen, Vesa, Tammela, Outi, Hallman, Mikko
Bronchopulmonary dysplasia (BPD), the most common chronic lung disease in infancy, is influenced by a number of antenatal and postnatal risk factors and is mostly preceded by respiratory distress...
Rova, Meri, Haataja, Ritva, Marttila, Riitta, Ollikainen, Vesa, Tammela, Outi, Hallman, Mikko
Bronchopulmonary dysplasia (BPD), the most common chronic lung disease in infancy, is influenced by a number of antenatal and postnatal risk factors and is mostly preceded by respiratory distress...
Simulation techniques for disease gene localization in isolated populations / (2002)
Diss. -- Helsingin yliopisto.
Data mining applied to linkage disequilibrium mapping (2000)
Päivi Onkamo, Kari Vasko, Vesa Ollikainen, Petteri Sevon, Heikki Mannila, ...
We introduce a new method for linkage disequilibrium mapping: haplotype pattern mining (HPM). The method, inspired by data mining methods, is based on discovery of recurrent patterns. We define a...
Data Mining Applied to Linkage Disequilibrium Mapping
Toivonen, Hannu T. T., Onkamo, Päivi, Vasko, Kari, Ollikainen, Vesa, Sevon, Petteri, Mannila, Heikki, ...
We introduce a new method for linkage disequilibrium mapping: haplotype pattern mining (HPM). The method, inspired by data mining methods, is based on discovery of recurrent patterns. We define a...
Hovatta, Iiris, Varilo, Teppo, Suvisaari, Jaana, Terwilliger, Joseph D., Ollikainen, Vesa, Arajärvi, Ritva, ...
Schizophrenia is a severe mental disorder affecting ∼1% of the world's population. Here, we report the results from a three-stage genomewide screen performed in a study sample from an internal...
Susceptibility Loci for Preeclampsia on Chromosomes 2p25 and 9p13 in Finnish Families
Laivuori, Hannele, Lahermo, Päivi, Ollikainen, Vesa, Widen, Elisabeth, Häivä-Mällinen, Leena, Sundström, Helena, ...
Preeclampsia is a common, pregnancy-specific disorder characterized by reduced placental perfusion, endothelial dysfunction, elevated blood pressure, and proteinuria. The pathogenesis of this...
Data Mining Applied to Linkage Disequilibrium Mapping
Toivonen, Hannu T. T., Onkamo, Päivi, Vasko, Kari, Ollikainen, Vesa, Sevon, Petteri, Mannila, Heikki, ...
We introduce a new method for linkage disequilibrium mapping: haplotype pattern mining (HPM). The method, inspired by data mining methods, is based on discovery of recurrent patterns. We define a...
Hovatta, Iiris, Varilo, Teppo, Suvisaari, Jaana, Terwilliger, Joseph D., Ollikainen, Vesa, Arajärvi, Ritva, ...
Schizophrenia is a severe mental disorder affecting ∼1% of the world's population. Here, we report the results from a three-stage genomewide screen performed in a study sample from an internal...
ELMOD2 Is a Candidate Gene for Familial Idiopathic Pulmonary Fibrosis
Hodgson, Ulla, Pulkkinen, Ville, Dixon, Morag, Peyrard-Janvid, Myriam, Rehn, Marko, Lahermo, Päivi, ...
We performed a genomewide scan in six multiplex families with familial idiopathic pulmonary fibrosis (IPF) who originated from southeastern Finland. The majority of the Finnish multiplex families...
PairsDB atlas of protein sequence space
Heger, Andreas, Korpelainen, Eija, Hupponen, Taavi, Mattila, Kimmo, Ollikainen, Vesa, Holm, Liisa
Sequence similarity/database searching is a cornerstone of molecular biology. PairsDB is a database intended to make exploring protein sequences and their similarity relationships quick and easy....