W. R. Scheible

A community resource for high-throughput quantitative RT-PCR analysis of transcription factor gene expression in Medicago truncatula (2008)

Kakar, K., Wandrey, M., Czechowski, T., Gaertner, T., Scheible, W. R., Stitt, M., ...

D-Glucose sensing by a plasma membrane regulator of G signaling protein, AtRGS1 (2008)

Grigston, J. C., Osuna, D., Scheible, W. R., Liu, C., Stitt, M., Jones, A. M.

Eleven golden rules of quantitative RT-PCR (2008)

Udvardi, M. K., Czechowski, T., Scheible, W. R.

MicroRNA399 is a long-distance signal for the regulation of plant phosphate homeostasis (2008)

Pant, B. D., Buhtz, A., Kehr, J., Scheible, W. R.

Phospholipase C5 (NPC5) is involved in galactolipid accumulation during phosphate limitation in leaves of Arabidopsis (2008)

Gaude, N., Nakamura, Y., Scheible, W. R., Ohta, H., Doermann, P.

A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors (2007)

Caldana, C., Scheible, W. R., Mueller-Roeber, B., Ruzicic, S.

BACKGROUND: Quantitative reverse transcription - polymerase chain reaction (qRT-PCR) has been demonstrated to be particularly suitable for the analysis of weakly expressed genes, such as those...

A conserved role for kinesin-5 in plant mitosis (2007)

Bannigan, A., Scheible, W. R., Lukowitz, W., Fagerstrom, C., Wadsworth, P., Somerville, C., ...

The mitotic spindle of vascular plants is assembled and maintained by processes that remain poorly explored at a molecular level. Here, we report that AtKRP125c, one of four kinesin-5 motor proteins...

Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings (2007)

Osuna, D., Usadel, B., Morcuende, R., Gibon, Y., Blasing, O. E., Hohne, M., ...

Arabidopsis seedlings were subjected to 2 days of carbon starvation, and then resupplied with 15 mM sucrose. The transcriptional and metabolic response was analyzed using ATH1 arrays, real-time...

Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus (2007)

Morcuende, R., Bari, R., Gibon, Y., Zheng, W. M., Pant, B. D., Blasing, O., ...

Affymetrix ATH1 arrays, large-scale real-time reverse transcription PCR of similar to 2200 transcription factor genes and other gene families, and analyses of metabolites and enzyme activities were...

A conserved role for kinesin-5 in plant mitosis (2007)

Bannigan, A., Scheible, W. R., Lukowitz, W., Fagerstrom, C., Wadsworth, P., Somerville, C., ...

A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors (2007)

Caldana, C., Scheible, W. R., Mueller-Roeber, B., Ruzicic, S.

Temporal responses of transcripts, enzyme activities and metabolites after adding sucrose to carbon-deprived Arabidopsis seedlings (2007)

Osuna, D., Usadel, B., Morcuende, R., Gibon, Y., Blaesing, O. E., Hoehne, M., ...

Genome-wide reprogramming of metabolism and regulatory networks of Arabidopsis in response to phosphorus (2007)

Morcuende, R., Bari, R., Gibon, Y., Zheng, W., Pant, B. D., Blaesing, O., ...

PHO2, microRNA399, and PHR1 define a phosphate-signaling pathway in plants (2006)

Bari, R., Pant, B. D., Stitt, M., Scheible, W. R.

Effect of sulfur availability on the integrity of amino acid biosynthesis in plants (2006)

Nikiforova, V. J., Bielecka, M., Gakiere, B., Krueger, S., Rinder, J., Kempa, S., ...

Sugar-induced increases in trehalose 6-phosphate are correlated with redox activation of ADPglucose pyrophosphorylase and higher rates of starch synthesis in Arabidopsis thaliana (2006)

Lunn, J. E., Feil, R., Hendriks, J. H. M., Gibon, Y., Morcuende, R., Osuna, D., ...

Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of coresponding genes, and comparison with known responses (2005)

Usadel, B., Nagel, A., Thimm, O., Redestig, H., Blaesing, O. E., Palacios-Rojas, N., ...

MapMan is a user-driven tool that displays large genomics datasets onto diagrams of metabolic pathways or other processes. Here, we present new developments, including improvements of the gene...

GRAS genes and the symbiotic Green Revolution (2005)

Udvardi, M. K., Scheible, W. R.

Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis (2005)

Czechowski, T., Stitt, M., Altmann, T., Udvardi, M. K., Scheible, W. R.

Gene transcripts with invariant abundance during development and in the face of environmental stimuli are essential reference points for accurate gene expression analyses, such as RNA gel-blot...

Repressor- and activator-type ethylene response factors functioning in jasmonate signaling and disease resistance identified via a genome-wide screen of Arabidopsis transcription factor gene expression (2005)

McGrath, K. C., Dombrecht, B., Manners, J. M., Schenk, P. M., Edgar, C. I., Maclean, D. J., ...

To identify transcription factors (TFs) involved in jasmonate (JA) signaling and plant defense, we screened 1,534 Arabidopsis (Arabidopsis thaliana) TFs by real-time quantitative reverse...

From markers to clones genes: Map-Based Cloning (2004)

Scheible, W. R., Törjek, O., Altmann, T.

Genome-wide reprogramming of primary and secondary metabolism, protein synthesis, cellular growth processes, and the regulatory infrastructure of Arabidopsis in response to nitrogen (2004)

Scheible, W. R., Morcuende, R., Czechowski, T., Fritz, C., Osuna, D., Palacios-Rojas, N., ...

Transcriptome analysis, using Affymetrix ATH1 arrays and a real-time reverse transcription-PCR platform for >1,400 transcription factors, was performed to identify processes affected by long-term...

Glycosyltransferases and cell wall biosynthesis: novel players and insights (2004)

Scheible, W. R., Pauly, M.

Plants need an enormous biosynthetic machinery to synthesize the complex polysaccharides that are present in the plant cell wall. The isolation, characterization and mapping of wall mutants, together...

Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes (2004)

Czechowski, T., Bari, R. P., Stitt, M., Scheible, W. R., Udvardi, M. K.

To overcome the detection limits inherent to DNA array-based methods of transcriptome analysis, we developed a real-time reverse transcription (RT)-PCR-based resource for quantitative measurement of...

The Arabidopsis SKU6/SPIRAL1 gene encodes a plus end-localized microtubule-interacting protein involved in directional cell expansion (2004)

Sedbrook, J. C., Ehrhardt, D. W., Fisher, S. E., Scheible, W. R., Somerville, C. R.

The sku6-1 mutant of Arabidopsis thaliana exhibits altered patterns of root and organ growth. sku6 roots, etiolated hypocotyls, and leaf petioles exhibit right-handed axial twisting, and root growth...

An Arabidopsis mutant resistant to thaxtomin A, a cellulose synthesis inhibitor from Streptomyces species (2003)

Scheible, W. R., Fry, B., Kochevenko, A., Schindelasch, D., Zimmerli, L., Somerville, S., ...

Thaxtomin A is a phytotoxin produced by Streptomyces scabies and other Streptomyces species, the causative agents of common scab disease in potato and other taproot crops. At nanomolar...

Plant cell walls in the post-genomic era (2003)

Scheible, W. R., Bashir, S., Rose, J. K. C.

The irregular xylem3 locus of Arabidopsis encodes a cellulose synthase required for secondary cell wall synthesis.

Taylor, N G, Scheible, W R, Cutler, S, Somerville, C R, Turner, S R

The irregular xylem3 (irx3) mutant of Arabidopsis has a severe deficiency in secondary cell wall cellulose deposition that leads to collapsed xylem cells. The irx3 mutation has been mapped to the top...

The irregular xylem3 locus of Arabidopsis encodes a cellulose synthase required for secondary cell wall synthesis.

Taylor, N G, Scheible, W R, Cutler, S, Somerville, C R, Turner, S R

The irregular xylem3 (irx3) mutant of Arabidopsis has a severe deficiency in secondary cell wall cellulose deposition that leads to collapsed xylem cells. The irx3 mutation has been mapped to the top...