Wenyuan Shi

Publication List Details

Period

1992 - 2006

Number

57

Co-Authors

Comparative Analysis of a Monoclonal Antibody-Based Streptococcus mutans Detection Method with Selective Culture Assays Using Polymerase Chain Reaction as a Gold Standard (2006)

Gu, Fang, Qi, Fengxia, Anderson, Maxwell H., Shi, Wenyuan

The aim of this study was to compare a recently developed monoclonal antibody (MAb)-based salivary Streptococcus mutans detection method with various selective media using polymerase chain reaction...

Effect of cellular filamentation on adventurous and social gliding motility of Myxococcus xanthus

Sun, Hong, Yang, Zhaomin, Shi, Wenyuan

Filamentous bacterial cells often provide biological information that is not readily evident in normal-size cells. In this study, the effect of cellular filamentation on gliding motility of...

Cariogenic Actinomyces Identified with a β-Glucosidase-Dependent Green Color Reaction to Gardenia jasminoides Extract

Chen, Li, Ma, Lili, Park, No-Hee, Shi, Wenyuan

The oral bacteria Actinomyces naeslundii and Actinomyces viscosus are known to contribute to the initiation and progression of human dental caries, especially root caries. We report that both A....

Myxococcus xanthus dif Genes Are Required for Biogenesis of Cell Surface Fibrils Essential for Social Gliding Motility

Yang, Zhaomin, Ma, Xiaoyuan, Tong, Leming, Kaplan, Heidi B., Shimkets, Lawrence J., Shi, Wenyuan

Myxococcus xanthus social (S) gliding motility has been previously reported by us to require the chemotaxis homologues encoded by the dif genes. In addition, two cell surface structures, type IV pili...

Analyses of mrp Genes during Myxococcus xanthus Development

Sun, Hong, Shi, Wenyuan

Myxococcus xanthus is a gram-negative soil bacterium that undergoes development under starvation conditions. Our previous study identified a new genetic locus, mrp, which is required for both...

Induction of Apoptotic Cell Death in Peripheral Blood Mononuclear and Polymorphonuclear Cells by an Oral Bacterium, Fusobacterium nucleatum

Jewett, Anahid, Hume, Wyatt R., Le, Ho, Huynh, Tri N., Han, Yiping W., Cheng, Genhong, ...

It is largely unknown why a variety of bacteria present in the oral cavity are capable of establishing themselves in the periodontal pockets of nonimmunocompromised individuals in the presence of...

Interactions between Periodontal Bacteria and Human Oral Epithelial Cells: Fusobacterium nucleatum Adheres to and Invades Epithelial Cells

Han, Yiping W., Shi, Wenyuan, Huang, George T.-J., Kinder Haake, Susan, Park, No-Hee, Kuramitsu, Howard, ...

Bacteria are causative agents of periodontal diseases. Interactions between oral bacteria and gingival epithelial cells are essential aspects of periodontal infections. Using an in vitro tissue...

Motility and Chemotaxis in Tissue Penetration of Oral Epithelial Cell Layers by Treponema denticola

Lux, Renate, Miller, James N., Park, No-Hee, Shi, Wenyuan

The ability to penetrate tissue is an important virulence factor for pathogenic spirochetes. Previous studies have recognized the role of motility in allowing pathogenic spirochetes to invade tissues...

Genetic Studies of mrp, a Locus Essential for Cellular Aggregation and Sporulation of Myxococcus xanthus

Sun, Hong, Shi, Wenyuan

Under starvation conditions, Myxococcus xanthus undergoes a complex developmental process which includes cellular aggregation and sporulation. A transposon insertion mutant (the Tn5-Ω280 mutant)...

A DnaK Homolog in Myxococcus xanthus Is Involved in Social Motility and Fruiting Body Formation

Yang, Zhaomin, Geng, Yongzhi, Shi, Wenyuan

Myxococcus xanthus is a gram-negative soil bacterium which exhibits a complex life cycle and social behavior. In this study, two developmental mutants of M. xanthus were isolated through Tn5...

Chemotaxis in Borrelia burgdorferi

Shi, Wenyuan, Yang, Zhaomin, Geng, Yongzhi, Wolinsky, Lawrence E., Lovett, Michael A.

Borrelia burgdorferi is a motile spirochete which has been identified as the causative microorganism in Lyme disease. The physiological functions which govern the motility of this organism have not...

Methylation of FrzCD Defines a Discrete Step in the Developmental Program of Myxococcus xanthus

Geng, Yongzhi, Yang, Zhaomin, Downard, John, Zusman, David, Shi, Wenyuan

Myxococcus xanthus is a gram-negative soil bacterium which undergoes fruiting body formation during starvation. The frz signal transduction system has been found to play an important role in this...

Mapping of Myxococcus xanthus Social Motility dsp Mutations to the dif Genes

Lancero, Hope, Brofft, Jennifer E., Downard, John, Birren, Bruce W., Nusbaum, Chad, Naylor, Jerome, ...

Myxococcus xanthus dsp and dif mutants have similar phenotypes in that they are deficient in social motility and fruiting body development. We compared the two loci by genetic mapping,...

Construction and Characterization of a cheA Mutant of Treponema denticola

Lux, Renate, Sim, Jee-Hyun, Tsai, Jon P., Shi, Wenyuan

The Treponema denticola cheA gene, encoding the central kinase of the general chemotaxis pathway, was analyzed for its role in chemotaxis and tissue penetration. The cheA gene was interrupted by...

A CheW Homologue Is Required for Myxococcus xanthus Fruiting Body Development, Social Gliding Motility, and Fibril Biogenesis

Bellenger, Kristen, Ma, Xiaoyuan, Shi, Wenyuan, Yang, Zhaomin

In bacteria with multiple sets of chemotaxis genes, the deletion of homologous genes or even different genes in the same operon can result in disparate phenotypes. Myxococcus xanthus is a bacterium...

Mutation of luxS Affects Biofilm Formation in Streptococcus mutans

Merritt, Justin, Qi, Fengxia, Goodman, Steven D., Anderson, Maxwell H., Shi, Wenyuan

Quorum sensing is a bacterial mechanism for regulating gene expression in response to changes in population density. Many bacteria are capable of acyl-homoserine lactone-based or peptide-based...

Extracellular polysaccharides mediate pilus retraction during social motility of Myxococcus xanthus

Li, Yinuo, Sun, Hong, Ma, Xiaoyuan, Lu, Ann, Lux, Renate, Zusman, David, ...

Myxococcus xanthus is a Gram-negative bacterium with a complex life cycle that includes vegetative swarming and fruiting-body formation. Social (S)-motility (coordinated movement of large cell...

Inactivation of the ciaH Gene in Streptococcus mutans Diminishes Mutacin Production and Competence Development, Alters Sucrose-Dependent Biofilm Formation, and Reduces Stress Tolerance

Qi, Fengxia, Merritt, Justin, Lux, Renate, Shi, Wenyuan

Many clinical isolates of Streptococcus mutans produce peptide antibiotics called mutacins. Mutacin production may play an important role in the ecology of S. mutans in dental plaque. In this study,...

Divergent Regulatory Pathways Control A and S Motility in Myxococcus xanthus through FrzE, a CheA-CheY Fusion Protein†

Li, Yinuo, Bustamante, Víctor H., Lux, Renate, Zusman, David, Shi, Wenyuan

Myxococcus xanthus moves on solid surfaces by using two gliding motility systems, A motility for individual-cell movement and S motility for coordinated group movements. The frz genes encode...

Nanoscale visualization and characterization of Myxococcus xanthus cells with atomic force microscopy

Pelling, Andrew E., Li, Yinuo, Shi, Wenyuan, Gimzewski, James K.

Multicellular microbial communities are the predominant form of existence for microorganisms in nature. As one of the most primitive social organisms, Myxococcus xanthus has been an ideal model...

Coordinated bacteriocin production and competence development: a possible mechanism for taking up DNA from neighbouring species

Kreth, Jens, Merritt, Justin, Shi, Wenyuan, Qi, Fengxia

It is important to ensure DNA availability when bacterial cells develop competence. Previous studies in Streptococcus pneumoniae demonstrated that the competence-stimulating peptide (CSP) induced...

Competition and Coexistence between Streptococcus mutans and Streptococcus sanguinis in the Dental Biofilm

Kreth, Jens, Merritt, Justin, Shi, Wenyuan, Qi, Fengxia

The human mucosal surface is colonized by the indigenous microflora, which normally maintains an ecological balance among different species. Certain environmental or biological factors, however, may...

Adding Selectivity to Antimicrobial Peptides: Rational Design of a Multidomain Peptide against Pseudomonas spp.

Eckert, Randal, Qi, Fengxia, Yarbrough, Daniel K., He, Jian, Anderson, Maxwell H., Shi, Wenyuan

Currently available antimicrobials exhibit broad killing with regard to bacterial genera and species. Indiscriminate killing of microbes by these conventional antibiotics can disrupt the ecological...

Effect of cellular filamentation on adventurous and social gliding motility of Myxococcus xanthus

Sun, Hong, Yang, Zhaomin, Shi, Wenyuan

Filamentous bacterial cells often provide biological information that is not readily evident in normal-size cells. In this study, the effect of cellular filamentation on gliding motility of...

Cariogenic Actinomyces Identified with a β-Glucosidase-Dependent Green Color Reaction to Gardenia jasminoides Extract

Chen, Li, Ma, Lili, Park, No-Hee, Shi, Wenyuan

The oral bacteria Actinomyces naeslundii and Actinomyces viscosus are known to contribute to the initiation and progression of human dental caries, especially root caries. We report that both A....

Myxococcus xanthus dif Genes Are Required for Biogenesis of Cell Surface Fibrils Essential for Social Gliding Motility

Yang, Zhaomin, Ma, Xiaoyuan, Tong, Leming, Kaplan, Heidi B., Shimkets, Lawrence J., Shi, Wenyuan

Myxococcus xanthus social (S) gliding motility has been previously reported by us to require the chemotaxis homologues encoded by the dif genes. In addition, two cell surface structures, type IV pili...

Analyses of mrp Genes during Myxococcus xanthus Development

Sun, Hong, Shi, Wenyuan

Myxococcus xanthus is a gram-negative soil bacterium that undergoes development under starvation conditions. Our previous study identified a new genetic locus, mrp, which is required for both...

Induction of Apoptotic Cell Death in Peripheral Blood Mononuclear and Polymorphonuclear Cells by an Oral Bacterium, Fusobacterium nucleatum

Jewett, Anahid, Hume, Wyatt R., Le, Ho, Huynh, Tri N., Han, Yiping W., Cheng, Genhong, ...

It is largely unknown why a variety of bacteria present in the oral cavity are capable of establishing themselves in the periodontal pockets of nonimmunocompromised individuals in the presence of...

Interactions between Periodontal Bacteria and Human Oral Epithelial Cells: Fusobacterium nucleatum Adheres to and Invades Epithelial Cells

Han, Yiping W., Shi, Wenyuan, Huang, George T.-J., Kinder Haake, Susan, Park, No-Hee, Kuramitsu, Howard, ...

Bacteria are causative agents of periodontal diseases. Interactions between oral bacteria and gingival epithelial cells are essential aspects of periodontal infections. Using an in vitro tissue...

Motility and Chemotaxis in Tissue Penetration of Oral Epithelial Cell Layers by Treponema denticola

Lux, Renate, Miller, James N., Park, No-Hee, Shi, Wenyuan

The ability to penetrate tissue is an important virulence factor for pathogenic spirochetes. Previous studies have recognized the role of motility in allowing pathogenic spirochetes to invade tissues...

Genetic Studies of mrp, a Locus Essential for Cellular Aggregation and Sporulation of Myxococcus xanthus

Sun, Hong, Shi, Wenyuan

Under starvation conditions, Myxococcus xanthus undergoes a complex developmental process which includes cellular aggregation and sporulation. A transposon insertion mutant (the Tn5-Ω280 mutant)...

A DnaK Homolog in Myxococcus xanthus Is Involved in Social Motility and Fruiting Body Formation

Yang, Zhaomin, Geng, Yongzhi, Shi, Wenyuan

Myxococcus xanthus is a gram-negative soil bacterium which exhibits a complex life cycle and social behavior. In this study, two developmental mutants of M. xanthus were isolated through Tn5...

Chemotaxis in Borrelia burgdorferi

Shi, Wenyuan, Yang, Zhaomin, Geng, Yongzhi, Wolinsky, Lawrence E., Lovett, Michael A.

Borrelia burgdorferi is a motile spirochete which has been identified as the causative microorganism in Lyme disease. The physiological functions which govern the motility of this organism have not...

Methylation of FrzCD Defines a Discrete Step in the Developmental Program of Myxococcus xanthus

Geng, Yongzhi, Yang, Zhaomin, Downard, John, Zusman, David, Shi, Wenyuan

Myxococcus xanthus is a gram-negative soil bacterium which undergoes fruiting body formation during starvation. The frz signal transduction system has been found to play an important role in this...

Mapping of Myxococcus xanthus Social Motility dsp Mutations to the dif Genes

Lancero, Hope, Brofft, Jennifer E., Downard, John, Birren, Bruce W., Nusbaum, Chad, Naylor, Jerome, ...

Myxococcus xanthus dsp and dif mutants have similar phenotypes in that they are deficient in social motility and fruiting body development. We compared the two loci by genetic mapping,...

Construction and Characterization of a cheA Mutant of Treponema denticola

Lux, Renate, Sim, Jee-Hyun, Tsai, Jon P., Shi, Wenyuan

The Treponema denticola cheA gene, encoding the central kinase of the general chemotaxis pathway, was analyzed for its role in chemotaxis and tissue penetration. The cheA gene was interrupted by...

A CheW Homologue Is Required for Myxococcus xanthus Fruiting Body Development, Social Gliding Motility, and Fibril Biogenesis

Bellenger, Kristen, Ma, Xiaoyuan, Shi, Wenyuan, Yang, Zhaomin

In bacteria with multiple sets of chemotaxis genes, the deletion of homologous genes or even different genes in the same operon can result in disparate phenotypes. Myxococcus xanthus is a bacterium...

Mutation of luxS Affects Biofilm Formation in Streptococcus mutans

Merritt, Justin, Qi, Fengxia, Goodman, Steven D., Anderson, Maxwell H., Shi, Wenyuan

Quorum sensing is a bacterial mechanism for regulating gene expression in response to changes in population density. Many bacteria are capable of acyl-homoserine lactone-based or peptide-based...

Extracellular polysaccharides mediate pilus retraction during social motility of Myxococcus xanthus

Li, Yinuo, Sun, Hong, Ma, Xiaoyuan, Lu, Ann, Lux, Renate, Zusman, David, ...

Myxococcus xanthus is a Gram-negative bacterium with a complex life cycle that includes vegetative swarming and fruiting-body formation. Social (S)-motility (coordinated movement of large cell...

Inactivation of the ciaH Gene in Streptococcus mutans Diminishes Mutacin Production and Competence Development, Alters Sucrose-Dependent Biofilm Formation, and Reduces Stress Tolerance

Qi, Fengxia, Merritt, Justin, Lux, Renate, Shi, Wenyuan

Many clinical isolates of Streptococcus mutans produce peptide antibiotics called mutacins. Mutacin production may play an important role in the ecology of S. mutans in dental plaque. In this study,...

Divergent Regulatory Pathways Control A and S Motility in Myxococcus xanthus through FrzE, a CheA-CheY Fusion Protein†

Li, Yinuo, Bustamante, Víctor H., Lux, Renate, Zusman, David, Shi, Wenyuan

Myxococcus xanthus moves on solid surfaces by using two gliding motility systems, A motility for individual-cell movement and S motility for coordinated group movements. The frz genes encode...

Nanoscale visualization and characterization of Myxococcus xanthus cells with atomic force microscopy

Pelling, Andrew E., Li, Yinuo, Shi, Wenyuan, Gimzewski, James K.

Multicellular microbial communities are the predominant form of existence for microorganisms in nature. As one of the most primitive social organisms, Myxococcus xanthus has been an ideal model...

Competition and Coexistence between Streptococcus mutans and Streptococcus sanguinis in the Dental Biofilm

Kreth, Jens, Merritt, Justin, Shi, Wenyuan, Qi, Fengxia

The human mucosal surface is colonized by the indigenous microflora, which normally maintains an ecological balance among different species. Certain environmental or biological factors, however, may...

Adding Selectivity to Antimicrobial Peptides: Rational Design of a Multidomain Peptide against Pseudomonas spp.

Eckert, Randal, Qi, Fengxia, Yarbrough, Daniel K., He, Jian, Anderson, Maxwell H., Shi, Wenyuan

Currently available antimicrobials exhibit broad killing with regard to bacterial genera and species. Indiscriminate killing of microbes by these conventional antibiotics can disrupt the ecological...

Targeted Killing of Streptococcus mutans by a Pheromone-Guided “Smart” Antimicrobial Peptide

Eckert, Randal , He, Jian, Yarbrough, Daniel K., Qi, Fengxia, Anderson, Maxwell H., Shi, Wenyuan

Within the repertoire of antibiotics available to a prescribing clinician, the majority affect a broad range of microorganisms, including the normal flora. The ecological disruption resulting from...

Enhancement of Antimicrobial Activity against Pseudomonas aeruginosa by Coadministration of G10KHc and Tobramycin▿

Eckert, Randal, Brady, Keith M., Greenberg, E. Peter, Qi, Fengxia, Yarbrough, Daniel K., He, Jian, ...

Pseudomonas aeruginosa is a common opportunistic human pathogen that is associated with life-threatening acute infections and chronic airway colonization during cystic fibrosis. Previously, we...

Use of Quantum Dot Luminescent Probes To Achieve Single-Cell Resolution of Human Oral Bacteria in Biofilms▿

Chalmers, Natalia I., Palmer, Robert J., Du-Thumm, Laurence, Sullivan, Richard, Shi, Wenyuan, Kolenbrander, Paul E.

Oral biofilms are multispecies communities, and in their nascent stages of development, numerous bacterial species engage in interspecies interactions. Better insight into the spatial relationship...

β-d-Allose Inhibits Fruiting Body Formation and Sporulation in Myxococcus xanthus▿

Chavira, Marielena, Cao, Nga, Le, Karen, Riar, Tanveer, Moradshahi, Navid, McBride, Melinda, ...

Myxococcus xanthus, a gram-negative soil bacterium, responds to amino acid starvation by entering a process of multicellular development which culminates in the assembly of spore-filled fruiting...

Novel Synthetic Antimicrobial Peptides against Streptococcus mutans▿

He, Jian, Eckert, Randal, Pharm, Thanh, Simanian, Maurice D., Hu, Chuhong, Yarbrough, Daniel K., ...

Streptococcus mutans, a common oral pathogen and the causative agent of dental caries, has persisted and even thrived on the tooth surface despite constant removal and eradication efforts. In this...

SO-LAAO, a Novel l-Amino Acid Oxidase That Enables Streptococcus oligofermentans To Outcompete Streptococcus mutans by Generating H2O2 from Peptone▿ †

Tong, Huichun, Chen, Wei, Shi, Wenyuan, Qi, Fengxia, Dong, Xiuzhu

We previously demonstrated that Streptococcus oligofermentans suppressed the growth of Streptococcus mutans, the primary cariogenic pathogen, by producing hydrogen peroxide (H2O2) through lactate...

Interspecies Interactions within Oral Microbial Communities

Kuramitsu, Howard K., He, Xuesong, Lux, Renate, Anderson, Maxwell H., Shi, Wenyuan

Summary: While reductionism has greatly advanced microbiology in the past 400 years, assembly of smaller pieces just could not explain the whole! Modern microbiologists are learning “system...

Three-Dimensional Macromolecular Organization of Cryofixed Myxococcus xanthus Biofilms as Revealed by Electron Microscopic Tomography ▿ †

Palsdottir, Hildur, Remis, Jonathan P., Schaudinn, Christoph, O'Toole, Eileen, Lux, Renate, Shi, Wenyuan, ...

Despite the fact that most bacteria grow in biofilms in natural and pathogenic ecosystems, very little is known about the ultrastructure of their component cells or about the details of their...