Bindewald, Eckart, Hayes, Robert, Yingling, Yaroslava G., Kasprzak, Wojciech, Shapiro, Bruce A.
We developed a database called RNAJunction that contains structure and sequence information for RNA structural elements such as helical junctions, internal loops, bulges and loop–loop interactions....
Bruce A. Shapiro, Wojciech Kasprzak
RNA folding pathways are proving to be quite important in the determination of RNA function. Studies indicate that RNA may enter intermediate conformational states that are key to its functionality....
Structural polymorphism of the HIV-1 leader region explored by computational methods (2005)
Kasprzak, Wojciech, Bindewald, Eckart, Shapiro, Bruce A.
Experimental studies revealed that the elements of the human immunodeficiency virus type 1 (HIV-1) 5′-untranslated leader region (5′-UTR) can fold in vitro into two alternative conformations,...
Atha, Donald H., Kasprzak, Wojciech, OConnell, Catherine D., Shapiro, Bruce A.
We have analyzed previously three representative p53 single-point mutations by capillary-electrophoresis single-strand conformation polymorphism (CE-SSCP). In the current study, we compared our...
Atha, Donald H., Kasprzak, Wojciech, O’Connell, Catherine D., Shapiro, Bruce A.
We have analyzed previously three representative p53 single-point mutations by capillary-electrophoresis single-strand conformation polymorphism (CE-SSCP). In the current study, we compared our...
Structural polymorphism of the HIV-1 leader region explored by computational methods
Kasprzak, Wojciech, Bindewald, Eckart, Shapiro, Bruce A.
Experimental studies revealed that the elements of the human immunodeficiency virus type 1 (HIV-1) 5′-untranslated leader region (5′-UTR) can fold in vitro into two alternative conformations,...
Atha, Donald H., Kasprzak, Wojciech, O’Connell, Catherine D., Shapiro, Bruce A.
We have analyzed previously three representative p53 single-point mutations by capillary-electrophoresis single-strand conformation polymorphism (CE-SSCP). In the current study, we compared our...
Structural polymorphism of the HIV-1 leader region explored by computational methods
Kasprzak, Wojciech, Bindewald, Eckart, Shapiro, Bruce A.
Experimental studies revealed that the elements of the human immunodeficiency virus type 1 (HIV-1) 5′-untranslated leader region (5′-UTR) can fold in vitro into two alternative conformations,...
Bindewald, Eckart, Hayes, Robert, Yingling, Yaroslava G., Kasprzak, Wojciech, Shapiro, Bruce A.
We developed a database called RNAJunction that contains structure and sequence information for RNA structural elements such as helical junctions, internal loops, bulges and loop–loop interactions....
Structural Domains within the 3′ Untranslated Region of Turnip Crinkle Virus▿
McCormack, John C., Yuan, Xuefeng, Yingling, Yaroslava G., Kasprzak, Wojciech, Zamora, Rodolfo E., Shapiro, Bruce A., ...
The genomes of positive-strand RNA viruses undergo conformational shifts that complicate efforts to equate structures with function. We have initiated a detailed analysis of secondary and tertiary...