Bmc Bioinformatics, Yong Seok Lee, Tae-hyung Kim, Tae-wook Kang, Won-hyong Chung, Gwang-sik Shin
WSPMaker: a web tool for calculating selection pressure in proteins and domains using window-sliding
Lee, Yong, Kim, Tae-Hyung, Kang, Tae-Wook, Chung, Won-Hyong, Shin, Gwang-Sik
Abstract Background In the study of adaptive evolution, it is important to detect the protein coding sites where natural selection is acting. In general, the ratio of the rate of non-synonymous...
S: ECgene: an alternative splicing database update (2008)
Yeunsook Lee, Younghee Lee, Bumjin Kim, Youngah Shin, Seungyoon Nam, Pora Kim, ...
ECgene
Kim, Byoung-Chul, Kim, Woo-Yeon, Park, Daeui, Chung, Won-Hyong, Shin, Kwang-sik, Bhak, Jong
Abstract Background Analysis of single nucleotide polymorphism (SNP) is becoming a key research in genomics fields. Many functional analyses of SNPs have been carried out for coding regions and...
Kang, Cheol-Hee, Nam, Young-Do, Chung, Won-Hyong, Quan, Zhe-Xue, Park, Yong-Ha, Park, Soo-Je, ...
DNA-DNA hybridization has been established as an important technology in bacterial species taxonomy and phylogenetic analysis. In this study, we analyzed how the efficiency with which the genomic DNA...
Development of a Meta-Information System for Microbial Resources (2008)
Yu, Jae-Woo, Chung, Won-Hyong, Sohn, Tae-Kwon, Park, Yong-Ha, Kim, Hong-Ik
Microbes are one of the most important bioresources in bioindustry and provide high economic values. Although there are currently about 6,000 bacterial species with validly published names,...
ECgene: an alternative splicing database update (2007)
Lee, Yeunsook, Lee, Younghee, Kim, Bumjin, Shin, Youngah, Nam, Seungyoon, Kim, Pora, ...
ECgene (http://genome.ewha.ac.kr/ECgene) was developed to provide functional annotation for alternatively spliced genes. The applications encompass the genome-based transcript modeling for...
Running title: Hierarchical Probe Design (HPD) (2005)
Won-hyong Chung, Sung-keun Rhee, Xiu-feng Wan, Jin-woo Bae, These Contributed Equally
Motivation: Analysis of the functions of microorganisms and their dynamics in the environment is essential for understanding microbial ecology. For analysis of highly similar sequences of a...
Design of long oligonucleotide probes for functional gene detection in a microbial community (2005)
Chung, Won-Hyong, Rhee, Sung-Keun, Wan, Xiu-Feng, Bae, Jin-Woo, Quan, Zhe-Xue, Park, Yong-Ha
Motivation: Analysis of the functions of microorganisms and their dynamics in the environment is essential for understanding microbial ecology. For analysis of highly similar sequences of a...
Design of long oligonucleotide probes for functional gene detection in a microbial community (2005)
Chung, Won-Hyong, Rhee, Sung-Keun, Wan, Xiu-Feng, Bae, Jin-Woo, Quan, Zhe-Xue, Park, Yong-Ha
Motivation: Analysis of the functions of microorganisms and their dynamics in the environment is essential for understanding microbial ecology. For analysis of highly similar sequences of a...
Development and Evaluation of Genome-Probing Microarrays for Monitoring Lactic Acid Bacteria†
Bae, Jin-Woo, Rhee, Sung-Keun, Park, Ja Ryeong, Chung, Won-Hyong, Nam, Young-Do, Lee, Insun, ...
The genome-probing microarray (GPM) was developed for quantitative, high-throughput monitoring of community dynamics in lactic acid bacteria (LAB) fermentation through the deposit of 149 microbial...
Development and Evaluation of Genome-Probing Microarrays for Monitoring Lactic Acid Bacteria†
Bae, Jin-Woo, Rhee, Sung-Keun, Park, Ja Ryeong, Chung, Won-Hyong, Nam, Young-Do, Lee, Insun, ...
The genome-probing microarray (GPM) was developed for quantitative, high-throughput monitoring of community dynamics in lactic acid bacteria (LAB) fermentation through the deposit of 149 microbial...
ECgene: an alternative splicing database update
Lee, Yeunsook, Lee, Younghee, Kim, Bumjin, Shin, Youngah, Nam, Seungyoon, Kim, Pora, ...
ECgene () was developed to provide functional annotation for alternatively spliced genes. The applications encompass the genome-based transcript modeling for alternative splicing (AS), domain...