First-principles theory of coloration of WO$_3$ upon charge insertion (2009)
Xue, Yu, Zhang, Yong, Zhang, Peihong
We report first-principles investigations of the coloration of WO$_3$ upon charge insertion, using sodium tungsten bronze (Na$_x$WO$_3$) as a model system. Our results explain well the systematic...
MBA: a literature mining system for extracting biomedical abbreviations (2009)
Xu, Yun, Wang, ZhiHao, Lei, YiMing, Zhao, YuZhong, Xue, Yu
Abstract Background The exploding growth of the biomedical literature presents many challenges for biological researchers. One such challenge is from the use of a great deal of abbreviations....
Bmc Bioinformatics, Yun Xu, Zhihao Wang, Yiming Lei, Yuzhong Zhao, Yu Xue
Research article MBA: a literature mining system for extracting biomedical abbreviations
Abstract Background Previous studies have documented lower breast cancer survival among women with lower socioeconomic status (SES) in the United States. In this study, I examined the extent to which...
CSS-Palm 2.0: an updated software for palmitoylation sites prediction (2008)
Ren, Jian, Wen, Longping, Gao, Xinjiao, Jin, Changjiang, Xue, Yu, Yao, Xuebiao
Protein palmitoylation is an essential post-translational lipid modification of proteins, and reversibly orchestrates a variety of cellular processes. Identification of palmitoylated proteins with...
NBA-Palm: prediction of palmitoylation site implemented in Naïve Bayes algorithm (2006)
Xue, Yu, Chen, Hu, Jin, Changjiang, Sun, Zhirong, Yao, Xuebiao
Abstract Background Protein palmitoylation, an essential and reversible post-translational modification (PTM), has been implicated in cellular dynamics and plasticity. Although numerous experimental...
PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory (2006)
Xue, Yu, Li, Ao, Wang, Lirong, Feng, Huanqing, Yao, Xuebiao
Abstract Background As a reversible and dynamic post-translational modification (PTM) of proteins, phosphorylation plays essential regulatory roles in a broad spectrum of the biological processes....
MeMo: a web tool for prediction of protein methylation modifications (2006)
Hu Chen, Yu Xue, Ni Huang, Xuebiao Yao, Zhirong Sun
Protein methylation is an important and reversible post-translational modification of proteins (PTMs), which governs cellular dynamics and plasticity. Experimental identification of the methylation...
CSS-Palm: Palmitoylation Site Prediction with a Clustering and Scoring Strategy (CSS) (2006)
Fengfeng Zhou, Yu Xue, Xuebiao Yao, Ying Xu
The online version of this article has been published under an open access model. Users are entitled to use, reproduce, disseminate, or display the open access version of this article for...
doi:10.1093/nar/gkl207 SUMOsp: a web server for sumoylation site prediction (2006)
Yu Xue, Fengfeng Zhou, Chuanhai Fu, Ying Xu, Xuebiao Yao
Systematic dissection of the sumoylation proteome is emerging as an appealing but challenging research topic because of the significant roles sumoylation plays in cellular dynamics and plasticity....
MeMo: a web tool for prediction of protein methylation modifications (2006)
Chen, Hu, Xue, Yu, Huang, Ni, Yao, Xuebiao, Sun, Zhirong
Protein methylation is an important and reversible post-translational modification of proteins (PTMs), which governs cellular dynamics and plasticity. Experimental identification of the methylation...
SUMOsp: a web server for sumoylation site prediction (2006)
Xue, Yu, Zhou, Fengfeng, Fu, Chuanhai, Xu, Ying, Yao, Xuebiao
Systematic dissection of the sumoylation proteome is emerging as an appealing but challenging research topic because of the significant roles sumoylation plays in cellular dynamics and plasticity....
CSS-Palm: palmitoylation site prediction with a clustering and scoring strategy (CSS) (2006)
Zhou, Fengfeng, Xue, Yu, Yao, Xuebiao, Xu, Ying
Summary: Palmitoylation is an important post-translational lipid modification of proteins. Unlike prenylation and myristoylation, palmitoylation is a reversible covalent modification, allowing for...
GPS: a comprehensive www server for phosphorylation sites prediction (2005)
Xue, Yu, Zhou, Fengfeng, Zhu, Minjie, Ahmed, Kashif, Chen, Guoliang, Yao, Xuebiao
Protein phosphorylation plays a fundamental role in most of the cellular regulatory pathways. Experimental identification of protein kinases' (PKs) substrates with their phosphorylation sites is...
Xue, Yu, Zhou, Fengfeng, Lu, Hualei, Chen, Guoliang, Yao, Xuebiao
Small Ubiquitin-related modifier (SUMO) proteins are widely expressed in eukaryotic cells, which are reversibly coupled to their substrates by motif recognition, called sumoylation. Two interesting...
Buddhism, war, and nationalism : Chinese monks in the struggle against Japan, 1931-1945 / (2004)
Typescript (photocopy).
The computation and analysis of helicopter impulsive noise /--by Yu Xue. (1994)
Thesis (Ph. D.)--University of Minnesota, 1994.
Numerical simulation of acoustic sources in unsteady transonic flow. (1989)
Thesis (M.S.)--Syracuse University, 1989.
GPS: a comprehensive www server for phosphorylation sites prediction
Xue, Yu, Zhou, Fengfeng, Zhu, Minjie, Ahmed, Kashif, Chen, Guoliang, Yao, Xuebiao
Protein phosphorylation plays a fundamental role in most of the cellular regulatory pathways. Experimental identification of protein kinases' (PKs) substrates with their phosphorylation sites is...
SUMOsp: a web server for sumoylation site prediction
Xue, Yu, Zhou, Fengfeng, Fu, Chuanhai, Xu, Ying, Yao, Xuebiao
Systematic dissection of the sumoylation proteome is emerging as an appealing but challenging research topic because of the significant roles sumoylation plays in cellular dynamics and plasticity....
MeMo: a web tool for prediction of protein methylation modifications
Chen, Hu, Xue, Yu, Huang, Ni, Yao, Xuebiao, Sun, Zhirong
Protein methylation is an important and reversible post-translational modification of proteins (PTMs), which governs cellular dynamics and plasticity. Experimental identification of the methylation...
NBA-Palm: prediction of palmitoylation site implemented in Naïve Bayes algorithm
Xue, Yu, Chen, Hu, Jin, Changjiang, Sun, Zhirong, Yao, Xuebiao
GPS: a comprehensive www server for phosphorylation sites prediction
Xue, Yu, Zhou, Fengfeng, Zhu, Minjie, Ahmed, Kashif, Chen, Guoliang, Yao, Xuebiao
Protein phosphorylation plays a fundamental role in most of the cellular regulatory pathways. Experimental identification of protein kinases' (PKs) substrates with their phosphorylation sites is...
SUMOsp: a web server for sumoylation site prediction
Xue, Yu, Zhou, Fengfeng, Fu, Chuanhai, Xu, Ying, Yao, Xuebiao
Systematic dissection of the sumoylation proteome is emerging as an appealing but challenging research topic because of the significant roles sumoylation plays in cellular dynamics and plasticity....
MeMo: a web tool for prediction of protein methylation modifications
Chen, Hu, Xue, Yu, Huang, Ni, Yao, Xuebiao, Sun, Zhirong
Protein methylation is an important and reversible post-translational modification of proteins (PTMs), which governs cellular dynamics and plasticity. Experimental identification of the methylation...
NBA-Palm: prediction of palmitoylation site implemented in Naïve Bayes algorithm
Xue, Yu, Chen, Hu, Jin, Changjiang, Sun, Zhirong, Yao, Xuebiao
GPS 2.0, a Tool to Predict Kinase-specific Phosphorylation Sites in Hierarchy *S⃞
Xue, Yu, Ren, Jian, Gao, Xinjiao, Jin, Changjiang, Wen, Longping, Yao, Xuebiao
Identification of protein phosphorylation sites with their cognate protein kinases (PKs) is a key step to delineate molecular dynamics and plasticity underlying a variety of cellular processes....
CSS-Palm 2.0: an updated software for palmitoylation sites prediction
Ren, Jian, Wen, Longping, Gao, Xinjiao, Jin, Changjiang, Xue, Yu, Yao, Xuebiao
Protein palmitoylation is an essential post-translational lipid modification of proteins, and reversibly orchestrates a variety of cellular processes. Identification of palmitoylated proteins with...