Yuan Lin

Publication List Details

Period

1967 - 2009

Number

94

Co-Authors

An alternative approach to determining average distance in a class of scale-free modular networks (2009)

Zhang, Zhongzhi, Lin, Yuan, Zhou, Shuigeng, Wang, Zhigang, Guan, Jihong

Various real-life networks of current interest are simultaneously scale-free and modular. Here we study analytically the average distance in a class of deterministically growing scale-free modular...

Average distance in a hierarchical scale-free network: an exact solution (2009)

Zhang, Zhongzhi, Lin, Yuan, Gao, Shuyang, Zhou, Shuigeng, Guan, Jihong

Various real systems simultaneously exhibit scale-free and hierarchical structure. In this paper, we study analytically average distance in a deterministic scale-free network with hierarchical...

Recursive Segmentation and Recognition Templates for 2D Parsing (2009)

Long (leo Zhu, Yuanhao Chen, Yuan Lin, Chenxi Lin, Alan Yuille

Language and image understanding are two major goals of artificial intelligence which can both be conceptually formulated in terms of parsing the input signal into a hierarchical representation....

Trapping in scale-free networks with hierarchical organization of modularity (2009)

Zhang, Zhongzhi, Lin, Yuan, Gao, Shuyang, Zhou, Shuigeng, Guan, Jihong, Li, Mo

A wide variety of real-life networks share two remarkable generic topological properties: scale-free behavior and modular organization, and it is natural and important to study how these two features...

Mean first-passage time for random walks on the T-graph (2009)

Zhang, Zhongzhi, Lin, Yuan, Zhou, Shuigeng, Wu, Bin, Guan, Jihong

For random walks on networks (graphs), it is a theoretical challenge to explicitly determine the mean first-passage time (MFPT) between two nodes averaged over all pairs. In this paper, we study the...

Rotation implementation of a circular cylinder in incompressible flow via staggered grid approach (2009)

Mingqing Xiao, Yuan Lin, James H. Myatt, R. Chris Camphouse, S. Banda

Abstract. In this paper, we present a finite difference method for the implementation of the rotation of a circular cylinder in the incompressible flow field by solving the two-dimensional unsteady...

Recursive solutions for Laplacian spectra and eigenvectors of a class of growing treelike networks (2009)

Zhang, Zhongzhi, Qi, Yi, Zhou, Shuigeng, Lin, Yuan, Guan, Jihong

The complete knowledge of Laplacian eigenvalues and eigenvectors of complex networks plays an outstanding role in understanding various dynamical processes running on them; however, determining...

A System Solution for High-Performance, Low Power SDR Abstract (2009)

Yuan Lin, Hyunseok Lee, Yoav Harel, Mark Woh, Scott Mahlke, Trevor Mudge, ...

One central challenge in the realization of Software Defined Radio (SDR) is to provide a programmable solution that meets the challenging high-performance, low-power requirements, while providing an...

Phenotypic and genotypic characterization of Human Immunodeficiency Virus type 1 CRF07_BC strains circulating in the Xinjiang Province of China (2009)

Ma Liying, Guo Yanfang, Yuan Lin, Huang Yang, Sun Jianping, Qu Shuiling, ...

Abstract Background HIV-1 CRF07_BC recombinant previously circulated mainly among the intravenous drug users (IDUs) in Xinjiang province of China and is currently spreading in the entire country. The...

The HuRef Browser: a web resource for individual human genomics (2009)

Axelrod, Nelson, Lin, Yuan, Ng, Pauline C., Stockwell, Timothy B., Crabtree, Jonathan, Huang, Jiaqi, ...

The HuRef Genome Browser is a web application for the navigation and analysis of the previously published genome of a human individual, termed HuRef. The browser provides a comparative view between...

The diploid genome sequence of an individual human (2008)

Samuel Levy, Granger Sutton, Pauline C. Ng, Lars Feuk, Aaron L. Halpern, Brian P. Walenz, ...

Presented here is a genome sequence of an individual human. It was produced from;32 million random DNA fragments, sequenced by Sanger dideoxy technology and assembled into 4,528 scaffolds, comprising...

Hierarchical Coarse-grained Stream Compilation for Software Defined Radio ABSTRACT (2008)

Yuan Lin, Manjunath Kudlur, Scott Mahlke, Trevor Mudge

Software Defined Radio (SDR) is an emerging embedded domain where the physical layer of wireless protocols is implemented in software rather than the traditional application specific hardware. The...

Cauliflower-like TiO2 rough spheres: Synthesis and applications in dye sensitized solar cells (2008)

Yang, Lei, Lin, Yuan, Jia, Hanguang, Li, Xueping, Xiao, Xurui, Zhou, Xiaowen

A series of mesoporous TiO2 rough spheres of alterable surface morphologies and pore structures were produced by altering initial temperatures and structural directing agents, Pluronic P105...

Modeling of dielectrophoresis in micro and nano systems (2008)

Lin, Yuan

This thesis presents models and simulations of dielectrophoretic separation of micro and nano particles. The fluid dynamics involved and the dielectric properties of water inside single-walled carbon...

Modeling of dielectrophoresis in micro and nano systems (2008)

Lin, Yuan

This thesis presents models and simulations of dielectrophoretic separation of micro and nano particles. The fluid dynamics involved and the dielectric properties of water inside single-walled carbon...

Parameterized Computation of LCS for Two Sequences (2008)

Yuan Lin

Abstract- The problem of finding the longest common subsequence is a well-known optimization problem because of its applications, especially in bioinformatics. In this paper, by applying the...

The diploid genome sequence of an individual human (2008)

Samuel Levy, Granger Sutton, Pauline C. Ng, Lars Feuk, Aaron L. Halpern, Brian P. Walenz, ...

Presented here is a genome sequence of an individual human. It was produced from;32 million random DNA fragments, sequenced by Sanger dideoxy technology and assembled into 4,528 scaffolds, comprising...

Analog ASICs (2008)

Yuan Lin, Hyunseok Lee, Mark Woh, Yoav Harel, Sangwon Seo, Rob Mullenix, ...

GPP+DSP+ASICs GPP+DSP+ASICs GPP+DSP+ASICs GPP+DSP+ASIC GPP+DSPs Analog ASICs Software Defined Radio (SDR): Use of software routines instead of ASICs for physical layer operations of wireless 802.11...

Equivalence of Two Approaches for Quantum-Classical Hybrid Systems (2008)

Zhan, Fei, Lin, Yuan, Wu, Biao

We discuss two approaches that are used frequently to describe quantum-classical hybrid system. One is the well-known mean-field theory and the other adopts a set of hybrid brackets which is a...

SPEX: A programming language for software defined radio (2008)

Yuan Lin, Robert Mullenix, Mark Woh, Scott Mahlke, Trevor Mudge, Alastair Reid, ...

High-throughput, low-power Software Defined Radio(SDR) solutions require multi-core SIMD DSP processors to meet real-time performance requirements. Given the difficulty in programming traditional...

Hierarchical Coarse-grained Stream Compilation for Software Defined Radio ABSTRACT (2008)

Yuan Lin, Manjunath Kudlur, Scott Mahlke, Trevor Mudge

Software Defined Radio (SDR) is an emerging embedded domain where the physical layer of wireless protocols is implemented in software rather than the traditional application specific hardware. The...

The Next Generation Challenge for Software Defined Radio (2008)

Mark Woh, Sangwon Seo, Hyunseok Lee, Yuan Lin, Scott Mahlke, Chaitali Chakrabarti, ...

Abstract. Wireless communication for mobile terminals has been a high performance computing challenge. It requires almost super computer performance while consuming very little power. This...

BY SEPARATING CONTROL AND DATA PROCESSING AND BY EMPLOYING ULTRAWIDE SIMD (2008)

Yuan Lin, Hyunseok Lee, Mark Woh, Yoav Harel, Scott Mahlke, Trevor Mudge, ...

...... Communication has become one of the central uses of computing technology, and applications that facilitate interpersonal communication, such as desktop publishing, graphic design, e-mail, and...

A System Solution for High-Performance, Low Power SDR (2008)

Yuan Lin, Yuan Lin Hyunseok, Yoav Harel, Mark Woh, Scott Mahlke, Trevor Mudge, ...

One central challenge in the realization of Software Defined Radio (SDR) is to provide a programmable solution that meets the challenging high-performance, low-power requirements, while providing an...

Period-2: a tumor suppressor gene in breast cancer (2008)

Xiang Shulin, Coffelt Seth, Mao Lulu, Yuan Lin, Cheng Qi, Hill Steven

Abstract Previous reports have suggested that the ablation of the Period 2 gene (Per 2) leads to enhanced development of lymphoma and leukemia in mice. Employing immunoblot analyses, we have...

catena-Poly[[aquadipyridinecopper(II)]-μ-fumarato] (2008)

Dong Xie, Junwei Ye, Yuan Lin, Guiling Ning

The title compound, [Cu(C4H2O4)(C5H5N)2(H2O)]n, is a one-dimensional coordination polymer based on pyridine and fumarate ligands. Each CuII cation is coordinated by two carboxylate O atoms belonging...

IDT SciTools: a suite for analysis and design of nucleic acid oligomers. (2008)

Dawson, Bruce Robert, Owczarzy, Richard, Tataurov, Andrey V., Wu, Yihe, Manthey, Jeffrey A., McQuisten, Kyle A., ...

© 2008 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which...

IDT SciTools: a suite for analysis and design of nucleic acid oligomers. (2008)

Dawson, Bruce Robert, Owczarzy, Richard, Tataurov, Andrey V., Wu, Yihe, Manthey, Jeffrey A., McQuisten, Kyle A., ...

© 2008 The Author(s) This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/2.0/uk/) which...

Un nouveau langage de workflow pour les sciences expérimentales (2008)

Lin, Yuan, Mougenot, Isabelle, Libourel Rouge, Thérèse

L’article propose un méta-modèle destiné à la construction de workflow scientifique. Le méta-modèle proposé découle d’une analyse de plusieurs autres méta-modèles de workflow existants.

Un nouveau langage de workflow pour les sciences expérimentales (2008)

Lin, Yuan, Mougenot, Isabelle, Libourel Rouge, Thérèse

L’article propose un méta-modèle destiné à la construction de workflow scientifique. Le méta-modèle proposé découle d’une analyse de plusieurs autres méta-modèles de workflow existants.

ARCHITECTURAL AND COMPILER MECHANISMS FOR ACCELERATING SINGLE THREAD APPLICATIONS ON MULTICORE PROCESSORS (2008)

Hongtao Zhong, Kevin Fan, Shuguang Feng, Shantanu Gupta, Amir Hormati, Manjunath Kudlur, ...

To my parents. ii ACKNOWLEDGEMENTS First, I would like to thank my adviser Professor Scott Mahlke. Scott has been a great mentor who provided priceless guidance, shown incredible patience and support...

IDT SciTools: a suite for analysis and design of nucleic acid oligomers (2008)

Owczarzy, Richard, Tataurov, Andrey V., Wu, Yihe, Manthey, Jeffrey A., McQuisten, Kyle A., Almabrazi, Hakeem G., ...

DNA and RNA oligomers are used in a myriad of diverse biological and biochemical experiments. These oligonucleotides are designed to have unique biophysical, chemical and hybridization properties. We...

Code Study: Automatic Parallelism Detection in Dyfesm (2007)

Yuan Lin And, Yuan Lin, David Padua

This paper reports the results of our study on the Perfect Benchmarks code DYFESM in order to determine how eective automatic parallelism detection techniques are on this code.

A Simple Framework to Calculate the Reaching Definition of Array References and Its Use in Subscript Array Analysis (2007)

Yuan Lin, David Padua

. The property analysis of subscript arrays can be used to facilitate the automatic detection of parallelism in sparse/irregular programs that use indirectly accessed arrays. In order for property...

Finite Element Methods for the Radiation of Ultrasonic Phased Arrays into an Acoustic Medium (2007)

Karl Grosh, John M. Dodson, Yuan Lin

In this paper, the dynamic response of a piezoelectric transducer in contact with an acoustic media is formulated. This serves as a model problem for an ultrasonic phased array in contact with the...

The Diploid Genome Sequence of an Individual Human (2007)

Samuel Levy, Granger Sutton, Pauline C. Ng, Lars Feuk, Aaron L. Halpern, Brian P. Walenz, ...

Presented here is a genome sequence of an individual human. It was produced from ∼32 million random DNA fragments, sequenced by Sanger dideoxy technology and assembled into 4,528 scaffolds,...

Electrothermal flow in Dielectrophoresis of Single-Walled Carbon Nanotubes (2007)

Lin, Yuan, Shiomi, Junichiro, Maruyama, Shigeo, Amberg, Gustav

We theoretically investigate the impact of the electrothermal flow on the dielectrophoretic separation of single-walled carbon nanotubes (SWNT). The electrothermal flow is observed to control the...

Ground states of hard-core bosons in one dimensional periodic potentials (2006)

Lin, Yuan, Wu, Biao

With Girardeau's Fermi-Bose mapping, we find the exact ground states of hard-core bosons residing in a one dimensional periodic potential. The analysis of these ground states shows that when the...

Numerical modeling of dielectrophoresis (2006)

Lin, Yuan

We investigate the dielectrophoretic separation of microparticles. Two different models are formulated in two characteristic time scales. The first model mainly accounts for the orientation behavior...

Numerical modeling of dielectrophoresis (2006)

Lin, Yuan

We investigate the dielectrophoretic separation of microparticles. Two different models are formulated in two characteristic time scales. The first model mainly accounts for the orientation behavior...

Simulation of dielectrophoretic motion of microparticles using a molecular dynamics approach (2006)

Lin, Yuan, Aldaeus, Fredrik, Amberg, Gustav, Roeraade, Johan

We model and simulate dielectrophoresis of microscale particles using the finite element method. A soft sphere system molecular dynamics model is presented, which solves a set of equations for the...

SODA: A Low-power Architecture For Software Radio (2006)

Yuan Lin, Yuan Lin Hyunseok, Mark Woh, Yoav Harel, Scott Mahlke, Trevor Mudge, ...

The physical layer of most wireless protocols is traditionally implemented in custom hardware to satisfy the heavy computational requirements while keeping power consumption to a minimum. These...

Design and Implementation of Turbo Decoders for Software Defined Radio (2006)

Yuan Lin, Scott Mahlke, Trevor Mudge, Chaitali Chakrabarti

Software Defined Radio(SDR) is an emerging paradigm for wireless terminals, in which the physical layer of communication protocols is implemented in software rather than by ASICs. Many of the current...

K.: Design and implementation of turbo decoders for software defined radio (2006)

Yuan Lin, Scott Mahike, Trevor Mudge

Software Defined Radio(SDR) is an emerging paradigm for wireless terminals, in which the physical layer of communication protocols is implemented in software rather than by ASICs. Many of the current...

Soda: A low-power architecture for software radio (2006)

Yuan Lin, Hyunseok Lee, Mark Woh, Yoav Harel, Scott Mahlke, Trevor Mudge, ...

The physical layer of most wireless protocols is traditionally implemented in custom hardware to satisfy the heavy computational requirements while keeping power consumption to a minimum. These...

Software Defined Radio - A High Performance Embedded Challenge (2005)

Hyunseok Lee, Yuan Lin, Yoav Harel, Mark Woh, Scott Mahlke, Trevor Mudge, ...

Wireless communication is one of the most computationally demanding workloads. It is performed by mobile terminals ("cell phones") and must be accomplished by a small battery powered system.

Host response after reconstruction of abdominal wall defects with porcine dermal collagen in a rat model (2004)

Lin, Yuan, Claerhout, Filip, Fastrez, Maxime, ...

OBJECTIVE: The purpose of this study was to compare the inflammatory response after implantation of Pelvicol with Prolene in a rat model. STUDY DESIGN: Full-thickness abdominal wall defects were...

Pulmonary toxicity of polyvinyl chloride particles after repeated intratracheal instillations in rats. Elevated CD4/CD8 lymphocyte ratio in bronchoalveolar lavage (2004)

Vanhooren, Hadewijch M, Yu, Lisong, Lin, Yuan, ...

Occupational exposure to polyvinyl chloride (PVC) particles has been associated with interstitial lung disease. Our previous study showed that a single intratracheal instillation of emulsion PVC...

A legal evaluation of the implication of SPS measures in GATT and WTO regime / (2004)

Lin, Yuan

Thesis (LL.M.), International Trade Law, Dept. of Law -- University of Essex, 2004.

A Programmable Vector Coprocessor Architecture for Wireless Applications (2004)

Yuan Lin, Nadev Baron, Hyunseok Lee, Scott Mahlke, Trevor Mudge

The physical layers of most wireless protocols are traditionally implemented in ASICs due to the heavy computation requirements. These solutions are costly to design and hardwired solutions that o#er...

A Programmable Vector Coprocessor Architecture for Wireless Applications (2004)

Yuan Lin, Nadev Baron, Hyunseok Lee, Scott Mahlke, Trevor Mudge

The physical layers of most wireless protocols are traditionally implemented in ASICs due to the heavy computation requirements. These solutions are costly to design and hardwired solutions that...

BC200 RNA in invasive and preinvasive breast cancer (2004)

Iacoangeli, Anna, Lin, Yuan, Morley, Eric J., Muslimov, Ilham A., Bianchi, Riccardo, Reilly, James, ...

BC200 RNA, a small functional RNA that operates as a translational modulator, has been implicated in the regulation of local synaptodendritic protein synthesis in neurons. Cell-type specific...

BC200 RNA in invasive and preinvasive breast cancer (2004)

Iacoangeli, Anna, Lin, Yuan, Morley, Eric J., Muslimov, Ilham A., Bianchi, Riccardo, Reilly, James, ...

BC200 RNA, a small functional RNA that operates as a translational modulator, has been implicated in the regulation of local synaptodendritic protein synthesis in neurons. Cell type-specific...

Formalizing Fact Extraction (2003)

Yuan Lin, Richard C. Holt

Schemas that define the form of facts extracted from source code are usually informal. The informal specifications of these schemas are too often incomplete or inconsistent. This paper takes the...

XML schema of biomolecular interaction network database and an XQuery use case / (2003)

Lin, Yuan.

XML is a Markup language, designed for structure data exchange over the web. Its flexibility in representing heterogeneous data and its similarity to ASN. 1 make it a good way to represent and store...

The relationship of sequence similarity and expression pattern similarity between yeast genes within gene families / (2001)

Lin, Yuan.

After gene duplication, the sequence and expression patterns of duplicated genes diverged. It is known that the function divergence of duplicated genes could be related to the divergence of both...

Analysis of irregular singleindexed array accesses and its applications in compiler optimizations (2000)

Yuan Lin, David Padua

Abstract. Many compiler techniques usually require analysis of array subscripts to determine whether a transformation is legal. Traditional methods require the array subscript expressions to be...

Compiler Analysis of Sparse and Irregular Computations (2000)

Yuan Lin, David A. Padua

this dissertation, we present compiler analysis techniques for sparse and irregular computations

Extended randomized hough transform for 2-D arbitrary shape recognition / (1999)

Lin, Yuan.

Thesis (M.Eng.)--Nanyang Technological University, School of Electrical and Electronic Engineering, 1999.

Numerical Simulations and Control of the Flow Past a Circular Cylinder (1998)

Xiao, Ming Qing, Lin, Yuan, Camphouse, R. C., Myatt, James H., Banda, Siva S.

A numerical method for a finite difference approach has been established for the analysis and control of the fluid behavior of flow past a cylinder. The discretization of the 2D Navier-Stokes...

On the Automatic Parallelization of Sparse and Irregular Fortran Programs (1998)

Yuan Lin, David Padua

. Automatic parallelization is usually believed to be less effective at exploiting implicit parallelism in sparse/irregular programs than in their dense/regular counterparts. However, not much is...

On the Automatic Parallelization of Sparse and Irregular Fortran Codes (1997)

Rafael Asenjo, E. Gutierrez, Y. Lin, D. Padua, B. Pottenger, E.L. Zapata, ...

This paper studies how well automatic parallelization techniques work on a collection of real codes with sparse and irregular access patterns. In conducting this work, we have compared existing...

On the Automatic Parallelization of Sparse and Irregular Fortran Codes (1997)

Rafael Asenjo, Eladio Gutierrez, Yuan Lin, David Padua, Bill Pottenger, Emilio Zapata

This paper studies howwell automatic parallelization techniques work on a collection of real codes with sparse and irregular access patterns. In conducting this work, wehave compared existing...

On the Automatic Parallelization of Sparse and Irregular Fortran Codes (1996)

Rafael Asenjo, Eladio Gutierrez, Yuan Lin, David Padua, Bill Pottenger, Emilio Zapata, ...

Irregular memory access patterns have traditionally caused difficulties in the automatic detection of parallelism, and in many cases parallelization is prevented. These problems are nonetheless...

The Regulatory Role of Myosin Light Chain Kinase as an Actin-Binding Protein (1994)

Ye, Li-Hong, Hayakawa, Kohichi, Lin, Yuan, Okagaki, Tsuyoshi, Fujita, Koichiro, Kohama, Kazuhiro

Myosin light chain kinase (MLCK) is present in muscle cells including those of smooth muscle as an actin-binding protein. By avoiding complication introduced as a result of kinase activity of MLCK,...

Stimulatory Effect of Calponin on Myosin ATPase Activity (1993)

Lin, Yuan, Ye, Li-Hong, Ishikawa, Ryoki, Fujita, Koichiro, Kohama, Kacuhiro

Calponin, a calmodulin-binding protein of smooth muscle that inhibits the actin-myosin interaction by binding to actin, was shown to bind to myosin and to stimulate the ATPase activity of myosin to...

Effect of age on the crystallinity of collagen. (1967)

Lin, Yuan.

Thesis (M.S.)--University of California, Davis.

Induction of Apoptosis by Paramyxovirus Simian Virus 5 Lacking a Small Hydrophobic Gene

Lin, Yuan, Bright, Angela C., Rothermel, Terri A., He, Biao

Simian virus 5 (SV5) is a member of the paramyxovirus family, which includes emerging viruses such as Hendra virus and Nipah virus as well as many important human and animal pathogens that have been...

Conserved Cysteine-Rich Domain of Paramyxovirus Simian Virus 5 V Protein Plays an Important Role in Blocking Apoptosis

Sun, Minghao, Rothermel, Terri A., Shuman, Laurie, Aligo, Jason A., Xu, Shibo, Lin, Yuan, ...

The paramyxovirus family includes many well-known human and animal pathogens as well as emerging viruses such as Hendra virus and Nipah virus. The V protein of simian virus 5 (SV5), a prototype of...

Induction of Apoptosis by Paramyxovirus Simian Virus 5 Lacking a Small Hydrophobic Gene

Lin, Yuan, Bright, Angela C., Rothermel, Terri A., He, Biao

Simian virus 5 (SV5) is a member of the paramyxovirus family, which includes emerging viruses such as Hendra virus and Nipah virus as well as many important human and animal pathogens that have been...

Conserved Cysteine-Rich Domain of Paramyxovirus Simian Virus 5 V Protein Plays an Important Role in Blocking Apoptosis

Sun, Minghao, Rothermel, Terri A., Shuman, Laurie, Aligo, Jason A., Xu, Shibo, Lin, Yuan, ...

The paramyxovirus family includes many well-known human and animal pathogens as well as emerging viruses such as Hendra virus and Nipah virus. The V protein of simian virus 5 (SV5), a prototype of...

The Diploid Genome Sequence of an Individual Human

Levy, Samuel, Sutton, Granger, Ng, Pauline C, Feuk, Lars, Halpern, Aaron L, Walenz, Brian P, ...

Presented here is a genome sequence of an individual human. It was produced from ∼32 million random DNA fragments, sequenced by Sanger dideoxy technology and assembled into 4,528 scaffolds,...

Akt Plays a Critical Role in Replication of Nonsegmented Negative-Stranded RNA Viruses▿

Sun, Minghao, Fuentes, Sandra M., Timani, Khalid, Sun, Dengyun, Murphy, Chris, Lin, Yuan, ...

The order Mononegavirales (comprised of nonsegmented negative-stranded RNA viruses or NNSVs) contains many important pathogens. Parainfluenza virus 5 (PIV5), formerly known as simian virus 5, is a...

Globalizing the Science Curriculum: An Undergraduate Course on Traditional Chinese Medicine as a Complementary Approach to Western Medicine

Yuan, Robert, Lin, Yuan

A course has been created to examine the ways in which China and the West have approached human health and medicine. Though fundamentally different, these two systems are complementary in a number of...

IDT SciTools: a suite for analysis and design of nucleic acid oligomers

Owczarzy, Richard, Tataurov, Andrey V., Wu, Yihe, Manthey, Jeffrey A., McQuisten, Kyle A., Almabrazi, Hakeem G., ...

DNA and RNA oligomers are used in a myriad of diverse biological and biochemical experiments. These oligonucleotides are designed to have unique biophysical, chemical and hybridization properties. We...

Plasma membrane deformation by circular arrays of ESCRT-III protein filaments

Hanson, Phyllis I., Roth, Robyn, Lin, Yuan, Heuser, John E.

Endosomal sorting complex required for transport III (ESCRT-III) proteins function in multivesicular body biogenesis and viral budding. They are recruited from the cytoplasm to the membrane, where...

Realizing Software Defined Radio - A Study in Designing Mobile Supercomputers.

Lin, Yuan

The physical layer of most wireless protocols is traditionally implemented in custom hardware to satisfy the heavy computational requirements while keeping power consumption to a minimum. These...

A Single Amino Acid Residue Change in the P Protein of Parainfluenza Virus 5 Elevates Viral Gene Expression▿

Timani, Khalid A., Sun, Dengyun, Sun, Minghao, Keim, Celia, Lin, Yuan, Schmitt, Phuong Tieu, ...

Parainfluenza virus 5 (PIV5) is a prototypical paramyxovirus. The V/P gene of PIV5 encodes two mRNA species through a process of pseudotemplated insertion of two G residues at a specific site during...

The HuRef Browser: a web resource for individual human genomics

Axelrod, Nelson, Lin, Yuan, Ng, Pauline C., Stockwell, Timothy B., Crabtree, Jonathan, Huang, Jiaqi, ...

The HuRef Genome Browser is a web application for the navigation and analysis of the previously published genome of a human individual, termed HuRef. The browser provides a comparative view between...

Phenomenon of “contact guidance” on the surface with nano-micro-groove-like pattern and cell physiological effects

ZHOU, Feng, Lin, YUAN, HUANG, He

The topography of material surface has important influence on cell behavior and physiological functions. Groove-like pattern has drawn much attention among various patterns, due to the phenomenon of...