What are the best routes for us to use for driving home tonight in rush hour traffic? (2009)
Danila, Bogdan, Sun, Yudong, Bassler, Kevin E.
We show that the capacity of a complex network that models a city street grid to support congested traffic can be optimized by using routes that collectively minimize the maximum ratio of betweenness...
Improved community structure detection using a modified fine tuning strategy (2009)
Sun, Yudong, Danila, Bogdan, Josic, Kresimir, Bassler, Kevin E.
The community structure of a complex network can be determined by finding the partitioning of its nodes that maximizes modularity. Many of the proposed algorithms for doing this work by recursively...
Integrating Multi-level Molecular Simulations across Heterogeneous Resources (2008)
Yudong Sun, Steve Mckeever, S. P. Sansom
Abstract — Biomolecular simulations play a key role in the study of complex biological processes at microscopic levels in which macromolecules such as proteins are involved. The simulations are...
Distributed particle simulation method on adaptive collaborative system (2008)
Yudong Sun, Zhengyu Liang, Cho-li Wang
This paper presents a distributed N-body method based on an adaptive collaborative system model. The collaborative system is formed by the distributed objects in a cluster. The system can be...
Exploring Microbial Genome Sequences to Identify Protein Families on the Grid (2008)
Yudong Sun, Anil Wipat, Matthew Pocock, Peter A. Lee, Keith Flanagan, James T. Worthington
Abstract—The analysis of microbial genome sequences can identify protein families that provide potential drug targets for new antibiotics. With the rapid accumulation of newly sequenced genomes,...
Jiannong Cao, Yudong Sun, Xianbin Wang, Sajal K. Das
Distributed web servers on the immensely expanding Internet require high scalability and availability to provide efficient services to millions of clients on the web. To provide rapid responses to...
Converting Biomolecular Modelling Data Based on an XML Representation (2008)
Biomolecular modelling has provided computational simulation based methods for investigating biological processes from quantum chemical to cellular levels. Modelling such microscopic processes...
Distributed Particle Simulation Method on Adaptive Collaborative System (2007)
Yudong Sun, Zhengyu Liang, Cho-Li Wang
This paper presents a distributed N-body method based on an adaptive collaborative system model. The collaborative system is built with the distributed objects in a cluster. It can be reconfigured...
1.1 Microbial Genome Sequencing and Comparison (2007)
Anil Wipat, Yudong Sun, Matthew Pocock, Pete Lee, Paul Watson, Keith Flanagan
Comparative analysis of genomes allows the rich source of biological genome sequence data to be most efficiently exploited. However, the rate at which microbial genomes are being sequenced is...
A taxonomy of application scheduling tools for high performance cluster computing (2006)
Jiannong Cao, Yudong Sun, Sajal K. Das, Minyi Guo
Abstract. Application scheduling plays an important role in high-performance cluster computing. Application scheduling can be classified as job scheduling and task scheduling. This paper presents a...
Exploring Microbial Genome Sequences to Identify Protein Families on the Grid (2005)
Y. Sun, A. Wipat, M. Pocock, P. Lee, K. Flanagan, J. Worthington, ...
Abstract—The analysis of microbial genome sequences can identify protein families that provide potential drug targets for new antibiotics. With the rapid accumulation of newly sequenced genomes,...
Flanagan K, Worthington J, Yudong Sun, Anil Wipat, Matthew Pocock, Pete A. Lee, ...
Genome comparison and analysis can reveal the structures and functions of genome sequences of different species. As more genomes are sequenced, genomic data sources are increasing in size and...
JT: A Grid-based System for Microbial Genome Comparison and Analysis (2004)
Yudong Sun, Anil Wipat, Matthew Pocock, Pete A. Lee, Paul Watson, Keith Flanagan, ...
Genome comparison and analysis can reveal the structures and functions of genome sequences of different species. As more genomes are sequenced, genomic data sources are rapidly increasing such that...
Dynamic configuration management in a graph-oriented Distributed Programming Environment (2003)
Jiannong Cao, Alvin Chan, Yudong Sun, Kang Zhang
Dynamic con#guration is a desirablepsirabl of a distributed system where dynamic modi #cation and extension to the system and theap7T;q1/K7k are required. It allows the system con#guration to...
A distributed object model for solving irregularly structured problems on distributed systems (2002)
A distributed object model for solving irregularly structured problems on distributed systems (2002)
A distributed object model for solving irregularly structured problems on distributed systems (2002)
Thesis (Ph. D.)--University of Hong Kong, 2002.
Thesis (Ph.D.)--University of Hong Kong, 2002.
Thesis (Ph. D.)--University of Hong Kong, 2002.
A Distributed Object-Oriented Method for Particle Simulations on Clusters (1999)
Yudong Sun, Zhengyu Liang, Cho-li Wang
Abstract. This paper describes a distributed object-oriented method for solving N-body problem of particle simulations. The method allows dynamic construction of a collaborative system based on the...
A Distributed Object-Oriented Method for Particle Simulations on Clusters (1999)
Yudong Sun, Zhengyu Liang, Cho-Li Wang
. This paper describes a distributed object-oriented method for solving N-body problem of particle simulations. The method allows dynamic construction of a collaborative system based on the...
Jiannong Cao, Yudong Sun, Y. Sun, S. K. Das, ...
A taxonomy of application scheduling tools for high performance