Knowledge-guided multi-scale independent component analysis for biomarker identification (2008)
Chen, Li, Xuan, Jianhua, Wang, Chen, Shih, Ie-Ming, Wang, Yue, Zhang, Zhen, ...
Abstract Background Many statistical methods have been proposed to identify disease biomarkers from gene expression profiles. However, from gene expression profile data alone, statistical methods...
caBIG™ VISDA: Modeling, visualization, and discovery for cluster analysis of genomic data (2008)
Zhu, Yitan, Li, Huai, Miller, David J, Wang, Zuyi, Xuan, Jianhua, Clarke, Robert, ...
Abstract Background The main limitations of most existing clustering methods used in genomic data analysis include heuristic or random algorithm initialization, the potential of finding poor local...
Wang, Guohua, Wang, Yadong, Feng, Weixing, Wang, Xin, Yang, Jack Y, Zhao, Yuming, ...
Abstract Background Prostate cancer is one of the leading causes of cancer death in men. Androgen ablation, the most commonly-used therapy for progressive prostate cancer, is ineffective once the...
Implementation of a Software Extraction Process (2008)
Software metrics are a useful tool for assessing software quality and for making predictions. But currently the interpretation of the measured values is based on personal experience and gut feeling....
Jureen, Roland, Koh, Tse H, Wang, Grace, Chai, Louis YA, Tan, Ai L, Chai, Tracy, ...
Abstract Background In Singapore, an outbreak of fungal keratitis caused by members of the Fusarium solani species complex (FSSC) was identified in March 2005 to May 2006 involving 66 patients....
Doping dependence of the upper critical field in La_{2-x}Sr_xCuO_4 from specific heat (2008)
The low-temperature specific heat of La_{2-x}Sr_xCuO_4 (LSCO) single crystals in magnetic field H up to 12 T has been examined over a wide range of doping (0.063=< p =
Motif-directed network component analysis for regulatory network inference (2008)
Wang, Chen, Xuan, Jianhua, Chen, Li, Zhao, Po, Wang, Yue, Clarke, Robert, ...
Abstract Background Network Component Analysis (NCA) has shown its effectiveness in discovering regulators and inferring transcription factor activities (TFAs) when both microarray data and...
Understanding the Paradoxical Effects of Power Control on the Capacity of Wireless Networks (2008)
Wang, Yue, Lui, John C. S., Chiu, Dah-Ming
Recent works show conflicting results: network capacity may increase or decrease with higher transmission power under different scenarios. In this work, we want to understand this paradox....
(E)-2-(Cyclohexylmethylene)succinic acid (2008)
Wei Wang, Yi Deng, Xiao-hui Cao, Yue Wang, Ling Qin
The title compound, C11H16O4, crystallizes with three molecules in the asymmetric unit. The cyclohexane ring adopts a chair conformation. Intermolecular O—H...O hydrogen bonds are observed and...
Effects of p53 gene on drug resistance in human lung cancer cell lines (2008)
Hong TAO, Yunzhong ZHU, Hui WANG, Baitang LAI, Xiuping ZHAN, Yue WANG, ...
Background and Objective Drug resistance of lung cancer cells is one of main factors which affect the outcome of chemotherapy. It has been reported that abnormal p53 gene is well assosiated with...
Junying Zhang, Le Wei, Xuerong Feng, Zhen Ma, Yue Wang
Independent component analysis (ICA) is a widely applicable and effective approach in blind source separation (BSS), with limitations that sources are statistically independent. However, more common...
Construction of a T7 Human Lung Cancer cDNA Library (2008)
Wentao YUE, Zitong WANG, Yue WANG, Lina ZHANG
Background and objective Currently, only a limited numbers of tumor markers for non small lung cancer (NSCLC) diagnosis, new biomarker, such as serum autoantibody may improve the early detection of...
Mu, Gang, Wang, Yue, Shan, Lei, Wen, Hai-Hu
We measured the resistivity, diamagnetization, and low-temperature specific heat of the newly discovered noncentrosymmetric superconductor Mg_(12-delta)Ir_19B_16. The temperature dependence of...
Nodeless Superconductivity in the Noncentrosymmetric Superconductor $Mg_{10}Ir_{19}B_{16}$ (2007)
Mu, Gang, Wang, Yue, Shan, Lei, Wen, Hai-Hu
We measured the resistivity, diamagnetization and low temperature specific heat of the newly discovered noncentrosymmetric superconductor $Mg_{10}Ir_{19}B_{16}$. It is found that the superconducting...
Gene Selection for Multiclass Prediction by Weighted Fisher Criterion (2007)
Jianhua Xuan, Yue Wang, Yibin Dong, Yuanjian Feng, Bin Wang, Javed Khan, ...
Gene expression profiling has been widely used to study molecular signatures of many diseases and to develop molecular diagnostics for disease prediction. Gene selection, as an important step for...
Improved Diagnostics Using Polarization Imaging and Artificial Neural Networks (2007)
Jianhua Xuan, Uwe Klimach, Hongzhi Zhao, Qiushui Chen, Yingyin Zou, Yue Wang
In recent years, there has been an increasing interest in studying the propagation of polarized light in biological cells and tissues. This paper presents a novel approach to cell or tissue imaging...
Ting Gong, Jianhua Xuan, Chen Wang, Huai Li, Eric Hoffman, Robert Clarke, ...
Genes mostly interact with each other to form transcriptional modules for performing single or multiple functions. It is important to unravel such transcriptional modules and to determine how...
Wang, Yue, Petersen, Maya L., Bangsberg, David, Van Der Laan, Mark J.
Inverse probability of treatment weighting (IPTW) is frequently used to estimate the causal effects of treatments and interventions. The consistency of the IPTW estimator relies not only on the...
Wang, Yue, Petersen, Maya L., Bangsberg, David, Van Der Laan, Mark J.
Inverse probability of treatment weighting (IPTW) is frequently used to estimate the causal effects of treatments and interventions. The consistency of the IPTW estimator relies not only on the...
Wang, Yue, Petersen, Maya L., Bangsberg, David, Van Der Laan, Mark J.
Inverse probability of treatment weighting (IPTW) is frequently used to estimate the causal effects of treatments and interventions. The consistency of the IPTW estimator relies not only on the...
Wang, Yue, Petersen, Maya L., Bangsberg, David, Van Der Laan, Mark J.
Inverse probability of treatment weighting (IPTW) is frequently used to estimate the causal effects of treatments and interventions. The consistency of the IPTW estimator relies not only on the...
Gao, Hong, Ren, Cong, Shan, Lei, Wang, Yue, Zhang, Yingzi, Zhao, Shiping, ...
The temperature and field dependence of reversible magnetization have been measured on a YBa$_2$Cu$_3$O$_{7-\delta}$ single crystal at six different doping concentrations. It is found that the data...
Xiao-Xian Gan, Li-Ying Shen, Yue Wang, Jian-Zu Ding, Hui-Ying Shen, Xiao-Peng Zeng, ...
A polyhistidine-tagged recombinant tegumental protein Schistosoma japonicum very lowdensity lipoprotein binding protein (SVLBP) from adult Schistosoma japonicum was expressed in Escherichia coli...
Gan,Xiao-Xian, Shen,Li-Ying, Wang,Yue, Ding,Jian-Zu, Shen,Hui-Ying, Zeng,Xiao-Peng, ...
A polyhistidine-tagged recombinant tegumental protein Schistosoma japonicum very lowdensity lipoprotein binding protein (SVLBP) from adult Schistosoma japonicum was expressed in Escherichia coli. The...
Modeling and Reconstruction of Mixed Functional and Molecular Patterns (2006)
Yue Wang, Jianhua Xuan, Rujirutana Srikanchana, Peter L. Choyke
Functional medical imaging promises powerful tools for the visualization and elucidation of important disease-causing biological processes in living tissue. Recent research aims to dissect the...
Nonrigid Medical Image Registration by Finite-Element Deformable Sheet-Curve Models (2006)
Jianhua Xuan, Yue Wang, Matthew T. Freedman, Tulay Adali, Peter Shields
Image-based change quantitation has been recognized as a promising tool for accurate assessment of tumor's early response to chemoprevention in cancer research. For example, various changes on breast...
Data-adaptive estimation in causal inference for point treatment study / (2006)
Thesis (Ph.D. in Biostatistics)--University of California, Berkeley, Fall 2006.
Thesis (Ph.D.)--Indiana University, 2006.
End-Permian mass extinction pattern in the northern peri-Gondwanan region (2006)
Shen, Shu Zhong, Cao, Chang-Qun, Henderson, Charles M., Wang, Xiang-Dong, Shi, Guang Rong, Wang, Yue, ...
The Permian-Triassic extinction pattern in the peri-Gondwanan region is documented biostratigraphically, geochemically and sedimentologically based on three marine sequences deposited in southern...
Pseudogap, Superconducting Energy Scale, and Fermi Arcs in Underdoped Cuprate Superconductors (2005)
Wen, Hai-Hu, Shan, Lei, Wen, Xiao-Gang, Wang, Yue, Gao, Hong, Liu, Zhi-Yong, ...
Through the measurements of magnetic field dependence of specific heat in $La_{2-x}Sr_xCuO_4$ in zero temperature limit, we determined the nodal slope $v_\Delta$ of the quasiparticle gap. It is found...
Securities Fraud: An Economic Analysis (2005)
This thesis develops an economic analysis of securities fraud. The thesis consists of a theory essay and an empirical essay. In the theory essay, I analyze a firm's propensity to commit securities...
Securities Fraud: An Economic Analysis (2005)
This thesis develops an economic analysis of securities fraud. The thesis consists of a theory essay and an empirical essay. In the theory essay, I analyze a firm's propensity to commit securities...
Pseudogap, Superconducting Gap, and Fermi Arcs in Underdoped Cuprate Superconductors (2005)
Wen, Hai-Hu, Shan, Lei, Wen, Xiao-Gang, Wang, Yue, Gao, Hong, Liu, Zhi-Yong, ...
Through the measurements of magnetic field dependence of specific heat in $La_{2-x}Sr_xCuO_4$ in zero temperature limit, we find that the nodal slope $v_\Delta$ of the superconducting gap has a very...
A cost of reproduction: Oxidative stress susceptibility in Drosophila melanogaster (2005)
A cost of reproduction is the trade-off between reproduction and survival. The studies presented in this dissertation investigated the mechanisms underling the cost of reproduction using Drosophila...
Zhao, Po, Seo, Jinwook, Wang, Zuyi, Wang, Yue, Shneiderman, Ben, Hoffman, Eric P.
We report a novel approach to identification of downstream targets of MyoD, where a published set of candidate targets from a well-controlled in vitro experiment [1] is filtered for relevance to...
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Zhao, Po, Seo, Jinwook, Wang, Zuyi, Wang, Yue, Shneiderman, Ben, Hoffman, Eric P.
We report a novel approach to identification of downstream targets of MyoD, where a published set of candidate targets from a well-controlled in vitro experiment [1] is filtered for relevance to...
Data Adaptive Estimation of the Treatment Specific Mean (2004)
Wang, Yue, Bembom, Oliver, Van Der Laan, Mark J.
An important problem in epidemiology and medical research is the estimation of the causal effect of a treatment action at a single point in time on the mean of an outcome, possibly within strata of...
Data Adaptive Estimation of the Treatment Specific Mean (2004)
Wang, Yue, Bembom, Oliver, Van Der Laan, Mark J.
An important problem in epidemiology and medical research is the estimation of the causal effect of a treatment action at a single point in time on the mean of an outcome, possibly within strata of...
Data Adaptive Estimation of the Treatment Specific Mean (2004)
Wang, Yue, Bembom, Oliver, Van Der Laan, Mark J.
An important problem in epidemiology and medical research is the estimation of the causal effect of a treatment action at a single point in time on the mean of an outcome, possibly within strata of...
Data Adaptive Estimation of the Treatment Specific Mean (2004)
Wang, Yue, Bembom, Oliver, Van Der Laan, Mark J.
An important problem in epidemiology and medical research is the estimation of the causal effect of a treatment action at a single point in time on the mean of an outcome, possibly within strata of...
Moon, James, Chang, Alfred E., Sabel, Michael S., Wang, Yue, Johnson, Timothy M., Lowe, Lori, ...
Background: Sentinel lymph node (SLN) biopsy allows surgeons to identify patients with subclinical nodal involvement who may benefit from lymphadenectomy and, possibly, adjuvant therapy. Several...
Monotone Constrained Tensor-product B-spline with application to screening studies (2004)
When different markers are responsive to different aspects of a disease, combination of multiple markers could provide a better screening test for early detection. It is also resonable to assume that...
Monotone Constrained Tensor-product B-spline with application to screening studies (2004)
When different markers are responsive to different aspects of a disease, combination of multiple markers could provide a better screening test for early detection. It is also resonable to assume that...
Monotone Constrained Tensor-product B-spline with application to screening studies (2004)
When different markers are responsive to different aspects of a disease, combination of multiple markers could provide a better screening test for early detection. It is also resonable to assume that...
Monotone Constrained Tensor-product B-spline with application to screening studies (2004)
When different markers are responsive to different aspects of a disease, combination of multiple markers could provide a better screening test for early detection. It is also resonable to assume that...
Statistical methods for utilizing biomarkers in clinical trials and screening studies. (2003)
Dissertation (Ph.D.)--University of Michigan.
Function of CD19 tyrosines in vivo / (2002)
Thesis (Ph. D)--University of Alabama at Birmingham, School of Joint Health Sciences, 2002.
Contractual joint ventures in China : formation, operation, and performance (2002)
Typescript (photocopy) Includes bibliographical references.
Yap, Wai Ho, Zhang, Zhenshui, Wang, Yue
We describe here the presence of two distinct types of rRNA operons in the genome of a thermophilic actinomycete Thermomonospora chromogena. The genome of T. chromogena contains six rRNA operons...
Conserved regulation of the lymphocyte-specific expression of lck in the Fugu and mammals
Brenner, Sydney, Venkatesh, Byrappa, Yap, Wai Ho, Chou, Chih-Fong, Tay, Alice, Ponniah, Sathivel, ...
The lck gene encodes a lymphocyte-specific protein-tyrosine kinase that is implicated in T cell maturation and signaling. In mammals, the transcription of the lck gene is regulated by two independent...
Weak Association between SEN Virus Viremia and Liver Disease
Yoshida, Hideo, Kato, Naoya, Shiratori, Yasushi, Shao, Runxuan, Wang, Yue, Shiina, Shuichiro, ...
Recently, a novel DNA virus designated SEN virus (SEN-V), which is thought to be related to posttransfusion hepatitis, was discovered. The aim of the present study was to clarify the relationship...
NF-κB protects from the lysosomal pathway of cell death
Liu, Ni, Raja, Srikumar M., Zazzeroni, Francesca, Metkar, Sunil S., Shah, Ramila, Zhang, Manling, ...
The programme of gene expression induced by RelA/NF-κB transcription factors is critical to the control of cell survival. Ligation of ‘death receptors’ such as tumor necrosis factor receptor 1...
Zheng, Xinde, Wang, Yanming, Wang, Yue
The human fungal pathogen Candida albicans switches from yeast to hyphal growth when exposed to serum or phagocytosed. However, the importance of this morphological switch for virulence remains...
Involvement of Notch signaling in hippocampal synaptic plasticity
Wang, Yue, Chan, Sic L., Miele, Lucio, Yao, Pamela J., Mackes, Jennifer, Ingram, Donald K., ...
During development of the nervous system, the fate of stem cells is regulated by a cell surface receptor called Notch. Notch is also present in the adult mammalian brain; however, because Notch null...
Global Transcriptome Analysis of the Heat Shock Response of Shewanella oneidensis† ‡
Gao, Haichun, Wang, Yue, Liu, Xueduan, Yan, Tingfen, Wu, Liyou, Alm, Eric, ...
Shewanella oneidensis is an important model organism for bioremediation studies because of its diverse respiratory capabilities. However, the genetic basis and regulatory mechanisms underlying the...
Transcriptome Analysis of Shewanella oneidensis MR-1 in Response to Elevated Salt Conditions
Liu, Yongqing, Gao, Weimin, Wang, Yue, Wu, Liyou, Liu, Xueduan, Yan, Tinfeng, ...
Whole-genomic expression patterns were examined in Shewanella oneidensis cells exposed to elevated sodium chloride. Genes involved in Na+ extrusion and glutamate biosynthesis were significantly...
Bai, Chen, Chan, Fong Yee, Wang, Yue
In Saccharomyces cerevisiae, the transcription factor Aft1p plays a central role in regulating many genes involved in iron acquisition and utilization. An aft1Δ mutant exhibits severely retarded...
A peptide motif Glu-Xaa-Xaa-Glu has been implicated in direct binding of ferric iron in several proteins involved in iron transport, sensing or storage. However, it is not known whether the motif...
Greig, Nigel H., Utsuki, Tadanobu, Ingram, Donald K., Wang, Yue, Pepeu, Giancarlo, Scali, Carla, ...
Like acetylcholinesterase, butyrylcholinesterase (BChE) inactivates the neurotransmitter acetylcholine (ACh) and is hence a viable therapeutic target in Alzheimer's disease, which is characterized by...
Wang, Yue, Wills, Norma M, Du, Zhihua, Rangan, Anupama, Atkins, John F, Gesteland, Raymond F, ...
Mutational and NMR methods were used to investigate features of sequence, structure, and dynamics that are associated with the ability of a pseudoknot to stimulate a -1 frameshift. In vitro...
Bai, Chen, Xu, Xiao-Li, Chan, Fong-Yee, Lee, Raymond Teck Ho, Wang, Yue
The cell walls of microbial pathogens mediate physical interactions with host cells and hence play a key role in infection. Mannosyltransferases have been shown to determine the cell wall properties...
Novel Suicide Ligands of Tubulin Arrest Cancer Cells in S-Phase1
Davis, Ashley, Jiang, Jian-Dong, Middleton, Kim M, Wang, Yue, Weisz, Imre, Ling, Yi-He, ...
It is presently accepted that the mechanism of action for all anti-tumor tubulin ligands involves the perturbation of microtubule dynamics during the G2/M phase of cell division and subsequent entry...